Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq52 163 4e-35 >seq52 Length=173047 Score = 163 bits (180), Expect = 4e-35 Identities = 631/974 (65%), Gaps = 18/974 (2%) Strand=Plus/Minus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 || || || |||||||| || || || ||||| | || | | | || | | |||||| Sbjct 72378 GCGACCGAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCA 72319 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| | || |||||||||| || | || | || || |||| |||| || Sbjct 72318 GTGCACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAA 72259 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||||| ||||| ||||| || | || || || | || | ||| | || || | | Sbjct 72258 GCATCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATAC 72199 Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGT--ATCTCTT--TTCTCTTTCGTATAGTG 62981 || | | || | ||||| || || ||||| | ||| ||| || |||||| | Sbjct 72198 CACA-GCTTCTGTGCCTTCAT---AG-TTTGTCGACCTCGACCTTCCCTCTCGTATT-TC 72145 Query 62982 TATACAATCG-TTCGAACTCGTCTCCCCAAACATTGTCC-AGTCCAGGACATTCATCCGG 63039 | | || | |||||||||||| || | || | | || ||||| |||| ||| Sbjct 72144 TCGAAAAGTGCTTCGAACTCGTCGCCATAG-CAGTCTGATAGACCAGGCGCCTCATTCGG 72086 Query 63040 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63099 || | | | ||| ||| || | || |||||| ||||| || | ||| || ||||| Sbjct 72085 GCAGAAAAGAGTCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCA 72026 Query 63100 AAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 63158 ||||| ||| || | ||| | | |||| ||||| ||||| ||||||| || | Sbjct 72025 CAGAGC-ATAGAACAAATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGT 71967 Query 63159 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63218 | |||| | | | ||| | |||||| || || | || ||||| | | ||||| | Sbjct 71966 TCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTC 71907 Query 63219 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 63278 ||||| || || ||||| | || | |||||||| | | | || || | ||| || | Sbjct 71906 TCTTGTTACCACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTA 71847 Query 63279 TAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTAC 63338 | ||| ||||||||||| || || || | || || || | || || || || Sbjct 71846 CGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGT 71787 Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398 || ||||| || || || || |||| ||||| | || || || | || | Sbjct 71786 GAACATTCAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGT 71727 Query 63399 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63458 | ||||| |||||||| || ||| |||||| | || || || |||||||| Sbjct 71726 CGTAGATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTG 71667 Query 63459 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518 | || || || || || | || || || || || |||||| |||| || | Sbjct 71666 CTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACA 71607 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578 || ||||| ||||| || || || || || | ||||| ||||| | ||||| Sbjct 71606 TGAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACAC 71547 Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT-TTTCAACAAGTAGGAT 63637 |||| | ||||||||| || || || || ||| | | || ||||| | ||| ||| Sbjct 71546 GCATAAGCATGTGCTGGGGCCTCTCCCAGA-CTTTTCCGTCATATTTCAGGAGGTATGAT 71488 Query 63638 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63697 | ||||| || || || ||||| || | ||| ||||| || ||||| | || | Sbjct 71487 CTCTCCAAGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCA 71428 Query 63698 GAGTTGAGTTTATC 63711 |||||||| | ||| Sbjct 71427 GAGTTGAGCTCATC 71414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627960596000