Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq144 107 2e-18 >seq144 Length=62325 Score = 107 bits (118), Expect = 2e-18 Identities = 119/157 (76%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || ||| ||||||| ||||||| || || || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| |||||| ||||| ||||| |||||||| |||| Sbjct 23786 GACACAATCGA--CAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACC 23843 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153 ||||||| | || || || ||||| ||| | || || Sbjct 23844 AACAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGA 23880 Score = 100 bits (110), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| |||| || ||||| || Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| ||| || | ||| ||||| ||||| ||||| ||||| Sbjct 23558 GACACTATCGACAACGTCA--AGAGC-AAGATTCA-GGACAAGGAAGGAATTCCTCCTGA 23613 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || || || ||||| || | ||||| | || || | ||| || Sbjct 23614 CCAGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTA 23673 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || ||||| || ||| | ||||| Sbjct 23674 CAACATCCAGAAGGAGTCCACCCTGCATCTTGTGCT 23709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325306595650