Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq53 163 3e-35 >seq53 Length=169705 Score = 163 bits (180), Expect = 3e-35 Identities = 371/551 (67%), Gaps = 13/551 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||| || || | || |||||||| || || | || ||| ||| || | Sbjct 76382 GCATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAG 76441 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 |||||| | || ||||| ||||||||||| || || || ||||| || || || || Sbjct 76442 ACCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAA 76501 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG--CGGAATTACTG 93268 ||||| || ||||| ||||| || || | ||| | || ||| || | | ||| Sbjct 76502 AATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGC-GAATGTGCTCTCCTTGTCTG 76560 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||||||| | |||||| ||||| || ||| | ||||| || | ||| ||||||||| Sbjct 76561 -AGATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCG 76619 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAAT-CTCGT--ATGTATGTATCGATTAACAGAGAA 93385 | || ||||| | ||| | | | ||| | | |||||| || || | || Sbjct 76620 TCGAACAGGTACT---GCTTCTGCTTTTGCTCCTTCACGTATGTGTCAATGAGCAAGCTG 76676 Query 93386 TACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCC 93445 ||||| || || |||| |||||||| || ||||| || ||||| |||| |||||| Sbjct 76677 TACATCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCTTCG 76736 Query 93446 GTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505 | | || ||||| ||| || | ||| | ||| || || ||||| || || || || Sbjct 76737 GGAACTTGGACTTCACCAGAGAAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCAGAG 76796 Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTA 93562 || || || || || | | || || |||| ||||| || || ||| || Sbjct 76797 GCAGCGAAGAAGGCGAGCACGTGGGAGATGAAATAACGTTCATCGTCGTTGAGCTTGTTG 76856 Query 93563 TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622 | ||| ||| || ||||| || || ||||| || || ||||||| ||||| |||| Sbjct 76857 TGCCAGTCGTGGAGGTCTTTGGACAGGTCGACCTCCTCAGCAGTCCAGAACGAAGCTTGA 76916 Query 93623 GCTTTTTTGTA 93633 ||| | ||||| Sbjct 76917 GCTCTCTTGTA 76927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857250012400