Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq144 132 4e-26 seq52 102 7e-17 seq130 93.3 4e-14 >seq144 Length=62325 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| |||| || ||||| |||| || ||||| ||| || || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||||| ||||||||||| || ||||||||||| ||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| || | ||||| | | || |||| || |||||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAAC 23905 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| || |||| || || ||| Sbjct 23906 ATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGGT 23953 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||| | || || || || | ||| | ||||| ||| | | Sbjct 23954 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCA 24013 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||||||||||||||||||||| || |||||| Sbjct 24014 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCAA 24073 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| || || || || |||||| || || | ||||| |||||| Sbjct 24074 CAGCGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAAC 24133 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||| |||| | ||| | ||| || | |||||| Sbjct 24134 ATTCAGAAGGAGAGCACGCTACACCTGGTTCTCCGACTGAGAGGAGGT 24181 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | || || || || |||| ||||| || || | Sbjct 23267 AAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCT 23326 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||| ||| | || || | || || || || ||||||||||| ||||| ||||| Sbjct 23327 AGCGACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGAC 23386 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||||||||||| || || || |||||| | || ||| |||||| | ||| ||| Sbjct 23387 CAACAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACTAC 23446 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || ||||| || ||| | || || || Sbjct 23447 AACATCCAGAAAGAGTCAACCCTCCACTTGGT 23478 >seq52 Length=173047 Score = 102 bits (112), Expect = 7e-17 Identities = 522/813 (64%), Gaps = 31/813 (4%) Strand=Plus/Minus Query 129699 CGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCA 129758 ||| |||| ||||||||| ||| |||| || ||||||||||||| || | ||| Sbjct 72373 CGAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCA 72314 Query 129759 CAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATT--ACTTTTCATGTTGCAAGCA 129816 ||| || || |||||||| | | ||| || || ||||| ||||||||||| Sbjct 72313 CAAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTC--TGTTGCAAGCA 72256 Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC 129876 || ||||| | |||| |||| ||||||| || ||| | ||| | || | | | | Sbjct 72255 TCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAG--CATACC 72198 Query 129877 A-AGTCTC-GAGCCTTGATCTGTCTTACAAATTTGCCACATT---TCTCGTATGCCACAT 129931 | || || | ||||| || || | | | | | || || |||||||| | | Sbjct 72197 ACAGCTTCTGTGCCTTCATA-GTTTGTCGACCTCG--ACCTTCCCTCTCGTATTTCTCGA 72141 Query 129932 ACAGTTGTTCAAATTCTGAGCCGT-GTACGGTG-TCGAGCAACGGCGATTCACGCGGACA 129989 | ||| ||| || || ||| | | | || | || || |||| ||| ||| || Sbjct 72140 AAAGTGCTTCGAACTCGTCGCCATAGCAGTCTGATAGACCA--GGCGCCTCATTCGGGCA 72083 Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049 | | | |||| | | | || ||||| ||||| ||||||||||| | |||||| Sbjct 72082 GAAAAGAGTCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAG 72023 Query 130050 GGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGC--ACCCATGTTACGTTTC--AGTT 130105 || || |||||||| || || |||| |||| | || || | | |||| || | Sbjct 72022 AGCATAGAACAAATCACGAGC---TCTAACCTCCTCCTTTCCGTGATTC-TTTCGGAGGT 71967 Query 130106 CAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC---CT 130162 | ||| || | | ||||| ||||| || |||| ||| || || | ||||| Sbjct 71966 TCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTC 71907 Query 130163 TCCGTTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCT 130222 || || || ||||| || || | ||| ||| |||| |||| | | ||| | Sbjct 71906 TCTTGTTACCACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTA 71847 Query 130223 CCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTAT 130282 | | ||||||| || ||||| |||| ||||| | ||| ||| || | || | Sbjct 71846 CGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGT 71787 Query 130283 GAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAA-TCGCGTAGCGTT 130341 |||| | ||||| ||||| || || |||||| |||| || ||| || | || || Sbjct 71786 GAACATTCAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTG-AGAGTG 71728 Query 130342 TCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGG 130401 || || || || | || |||||| || |||| | |||||| || || | || ||| Sbjct 71727 TCGTAGATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGT 71668 Query 130402 GCGTAACATGATCCGCTGGCAAACAAAGTTGGACTTGCATGTGTATACATTTTGTGTGCC 130461 || | || || | |||| ||| || ||||||||| |||| || || | | Sbjct 71667 GCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGAC 71608 Query 130462 ATCAAATTGTACGTTTCAAAAACGTTTTCAATG 130494 || | ||||| || || | | ||||||||| Sbjct 71607 ATGAGGTTGTAGGTCTCGATGGCCTTTTCAATG 71575 >seq130 Length=70983 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| || | || || || || |||| ||||| || || || | || ||| | Sbjct 38170 TTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATC 38111 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || || |||||||||||||| |||||||| || || || | Sbjct 38110 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGATTG 38051 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | || || ||| ||| ||||||| |||||||| || || Sbjct 38050 ATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAACATCCAGAA 37992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725391128150