Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq144 174 3e-38 seq130 147 4e-30 seq53 132 9e-26 seq125 104 4e-17 >seq144 Length=62325 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | ||| ||||| || |||||||| || || |||||||| || || || || Sbjct 23934 ACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCCGTCCTCG 23875 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || ||||| || |||| |||||||||||||||||||||||||||||||| Sbjct 23874 AGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGG 23815 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || | |||||| ||||| ||||| | ||||| ||||| | ||||||||||| Sbjct 23814 ATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGATGGTTTTG 23755 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| || || ||||| Sbjct 23754 CCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || |||||||| |||||||| || ||| Sbjct 23496 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTC 23437 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||| || || ||||| || || | |||||||||||| ||| Sbjct 23436 AAGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGA 23377 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||| || ||||||||||| ||| || || || Sbjct 23376 ATGCCCTCCTTGTCCTGGATCTTGCTCTTTACATTATCGATGGTGTC-GCTAGACTCGAC 23318 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||||||||||||||| |||||||| Sbjct 23317 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23270 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||| |||||||||| ||| || || ||||| || ||||| Sbjct 24180 CCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 24121 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || || ||||| || || || || | || ||||| || || ||| Sbjct 24120 AGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGA 24061 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| || |||||||||| ||||| ||| Sbjct 24060 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACT 24001 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| ||||| || || |||||||| || |||||||| Sbjct 24000 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 165 bits (182), Expect = 2e-35 Identities = 162/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || |||||||| || |||||||| || | || ||||| | Sbjct 23705 CAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCAA 23646 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || ||||| || ||||| || ||||| || ||||| ||||||||||| |||| Sbjct 23645 GCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAA 23586 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||||| ||||| ||||| | ||| || || || | |||||||| || | Sbjct 23585 TCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTCTTGC 23526 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||| ||||| |||||||| Sbjct 23525 CAGTCAAGGTCTTCACGAAGATCTGCAT 23498 >seq130 Length=70983 Score = 147 bits (162), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || ||||| | |||||| |||||||| || Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||||||||| || || |||||||| || ||||| |||||| ||| Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 38111 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||||| || || || || | ||||||||| || |||||||||||||| ||||| Sbjct 38112 ATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGAA 38170 >seq53 Length=169705 Score = 132 bits (146), Expect = 9e-26 Identities = 319/474 (67%), Gaps = 18/474 (4%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| | ||| || |||||||| || || || |||||||||||| | |||||| | Sbjct 76079 CATAATGCCGGCTTTCTGGTAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGC 76138 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| || ||||| || | | |||||| | || Sbjct 76139 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAGCCTTGTAGTACTTGGGATTGCC 76198 Query 10055 GAGTGCTG-TGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 | ||||| || | ||||| || ||||||||||| ||||| |||| ||| || Sbjct 76199 CA-TGCTGACCAACAGTCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATGGT 76257 Query 10114 TCATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||||| | || ||| | ||||| ||| || || ||| |||| ||| || |||| Sbjct 76258 TCATGCCCAACAGAGCGAC-GGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACG 76316 Query 10173 GCTTCCTCGACGATG-----CTCTTTACCA--CGTCAAGGGACAGCTTGTTCTCGAGCTT 10225 | |||||| |||| ||| | || | | | |||| | | ||| ||| | Sbjct 76317 G---CCTCGATGATGACTTTCTCAATGACATCCTTTGATGGAC-GGTGGTT---GAGGTG 76369 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 || ||||| | | || | ||| | ||||||||| ||| ||||| ||||| Sbjct 76370 GGAGAGAAGGAGGCATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTT 76429 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 ||| || ||||| |||||||| || || || |||||||| |||| | ||||| Sbjct 76430 GGAGAAGGTAAGACCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGA 76489 Query 10346 CCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA 10399 |||||||| | || |||||| ||| | |||||||||| |||| ||||| Sbjct 76490 GCCGGAGAAGAAAATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAA 76543 >seq125 Length=76066 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||| | || || |||||||| || |||||||| || || || Sbjct 47311 CCACCTCGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 47370 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || || ||||||||||| Sbjct 47371 AGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGG 47430 Query 68355 ATGCCTTCCTTGTCT 68369 ||||||||||||||| Sbjct 47431 ATGCCTTCCTTGTCT 47445 Score = 100 bits (110), Expect = 5e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 |||| ||||||| |||||| ||||||||||| | || || || || | |||||||| Sbjct 47497 CTTGGATCTTTGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGG 47556 Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| |||||||||||||||||||| |||||||| ||| Sbjct 47557 TTTTACCCGTGAGGGTCTTGACGAAGATCTGCATGATG 47594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616524657200