Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq53 306 7e-78 seq52 116 7e-21 >seq53 Length=169705 Score = 306 bits (338), Expect = 7e-78 Identities = 523/739 (71%), Gaps = 35/739 (5%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG--TTCA 42480 || ||||||||||| |||||||||||||| ||||| |||||||| || | || ||| Sbjct 76813 CTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCT--CCTCGAGCGCTTCT 76756 Query 42481 TGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAG 42539 || || || || | || || || |||||||| ||||||||||| || ||| Sbjct 76755 CTGGTGAAGTCCAAGTTCCC-GAAGCTCGATGCTTCTATGGCTTCCAGATCATGATGGAG 76697 Query 42540 AACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTC 42596 ||| | ||||| ||| ||||| | |||||| |||| ||| | ||| | Sbjct 76696 AACATCCACTCCGAGATGTACAGCT---TGCTCATTGACACATACGTGAAGGAGCAAA-- 76642 Query 42597 GAGCGTAACGGG---CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 ||| || | |||||| | || || || || || || || |||| ||||||||| Sbjct 76641 -AGCAGAAGCAGTACCTGTTCGACGCTATCGACACAATCCCATGTATCAGGAAGAAGGCC 76583 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCA-ACGTTCGGCGAGAGGCTGGTAGC 42712 || ||||| || |||||| || | | | || |||| || | || || || Sbjct 76582 GAATGGGCTCTTCGATGGATCTC-AGACAAGGAGAGCACATTCGCTCAGCGTCTCGTCGC 76524 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | ||||||||||| || |||||||| ||| | || |||||||||||||||||||| Sbjct 76523 CTTTGCTGCCGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAA 76464 Query 42773 GCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || |||| || ||||| || || |||||||| |||||||||||| | | ||||||| Sbjct 76463 GAAGCGAGGTCTC-ATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACGAGG 76405 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891 | |||| | ||||| || |||||||| |||| |||||||| ||| || || | Sbjct 76404 GCATGCACACTGACTTCGCATGCCTCCTTCTCTC---CCACCTCAACCACCGTCCATCAA 76348 Query 42892 AGGAGCGGGTCCGGGCCA---TCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 |||| ||| | | |||||| |||||||| | |||||| |||| ||||| | Sbjct 76347 AGGA---TGTCATTGAGAAAGTCATCATCGAGGCCGTCGGCATCGAGCAGGAATTCCTTA 76291 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 || | | || ||||| | ||| | ||||||||||| ||||||| |||| ||| Sbjct 76290 CGGAAGCCCTCCCCGTCGCTCTGTTGGGCATGAACCATACCCTCATGAAGCAGTATATCG 76231 Query 43009 AGTACGTCGCCGACCATCTCCTGTGCCAG-ATGGGTCTCAGCCGCCT-CTACAACACGCC 43066 ||| ||||||||||| || || | ||| ||||| | || | |||||| | | Sbjct 76230 AGTTCGTCGCCGACCGACTGTTG-GTCAGCATGGG-CAATCCCAAGTACTACAAGGCTAC 76173 Query 43067 GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAA 43126 ||| |||||||| |||||||||||||| ||| |||||||| ||||| |||||||| Sbjct 76172 CAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGCAAGACTAACTTCTTCGAGAA 76113 Query 43127 GCGCGTCGCCGACTACCAG 43145 |||||||| || |||||| Sbjct 76112 GCGCGTCGGTGATTACCAG 76094 >seq52 Length=173047 Score = 116 bits (128), Expect = 7e-21 Identities = 491/763 (64%), Gaps = 28/763 (4%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||| |||||||| || ||||| || | ||||||| ||||||||| ||||| | | Sbjct 72369 GCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAG 72310 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || | ||||||||||||| |||| || || |||||||| |||||| || |||||| Sbjct 72309 TTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTG 72250 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || |||||||| || || ||||| || || | | || | ||| || | | Sbjct 72249 TAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGCTTC 72190 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 ||||| | || ||| ||| | || || |||||| | | || || || Sbjct 72189 TGTGCCTTCATAGTTTGTCGA-CCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTGCTTC 72131 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGC---CGGGCACATGAGACT 244983 ||||||| ||| || || ||| || || || | | |||||| | ||| | Sbjct 72130 GAACTCGTCGCCATAGCAGTCTGATAGACCAGG---CGCCTCATTCGGGCAGAAAAGAGT 72074 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || | | || || | || |||||| | ||||||||||| || || | ||| Sbjct 72073 CCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAA 72014 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAA 245102 | || | | || ||| ||| || ||| ||||| | || | || || |||| Sbjct 72013 CAAATCACGAGCTCTAACCTCCTCCTTTCC-GTGATTCTTTCGGAGGTTCATGAACTCAA 71955 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 | || ||| | ||||| ||||| | |||| |||| |||||| || | |||||| || | Sbjct 71954 ATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCAC 71895 Query 245163 CCTGGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCG 245218 | || || | | | || || | |||| |||| | || | || || | ||| Sbjct 71894 CTTGATCGA----CATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCG 71839 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 || || ||||| ||||| ||||| | ||| | | | || ||| || || Sbjct 71838 TTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTG----TGAAC 71783 Query 245279 AT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGC 245334 || || | || || || | || ||||| | || || |||||| ||||| Sbjct 71782 ATTCAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTA 71723 Query 245335 TATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTT 245394 || ||||| || ||| |||||||| || || ||||| || |||| | | |||| Sbjct 71722 GATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACA-TTTGTGCTT 71664 Query 245395 G-GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 | || ||| | ||||||||||||||| ||| || ||||| Sbjct 71663 GTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAA 71621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333179837600