Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq144 134 3e-26 >seq144 Length=62325 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | ||| || || ||||| || ||||||| | Sbjct 23724 CCACCACGGAGACGAAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 23665 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || ||||||||||| | ||| || | || Sbjct 23664 AGGGTTCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGA 23605 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| || ||||| || || ||| || ||||| || |||| ||| || || || Sbjct 23604 ATTCCTTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATAGTGTCGGATGACTCAAC 23546 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 23545 CTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| || || || || | ||| || || ||||| || ||||| | | Sbjct 23952 CCACCTCGTAATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAG 23893 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | ||| || || ||||||||||| |||||||| ||| Sbjct 23892 AGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGA 23833 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || |||||||||| || || || || || | ||| ||||| ||| Sbjct 23832 ATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACT 23773 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || || || || ||||||||||| || || ||||| Sbjct 23772 TCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 Score = 107 bits (118), Expect = 5e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || |||||| | ||||| || ||||| | ||||| || ||||| Sbjct 23460 TCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAA 23401 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398 || ||||| ||||| || ||| || || || || |||||||| || ||| || || Sbjct 23400 ATAAGACGTTGTTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTTAC 23345 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | ||||| || || || || || ||||| ||||| || || || ||||| Sbjct 23344 ATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTT 23285 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 23284 GACGAAGATCTGCAT 23270 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| || || || || | |||||| || || || || || ||||||| || || || Sbjct 24171 AGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGA 24112 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || || || ||||| || || || ||||| | ||||||||| || ||| || || Sbjct 24111 CCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGA---TCCGGGGGAATACCC 24055 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || || || || || || | || ||||| || || | || ||||| ||||| | Sbjct 24054 TCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAA 23995 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||||||||| || |||||||| Sbjct 23994 GTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646691695780