Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq52 333 3e-86 seq53 118 1e-21 >seq52 Length=173047 Score = 333 bits (368), Expect = 3e-86 Identities = 1203/1850 (65%), Gaps = 59/1850 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| ||| | |||| | | ||||||||||||||| ||||||||||| | Sbjct 73283 TGAACTGAATTGGTGCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGTCTTGAGAC 73224 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGA-CTTTCCA-T 113682 || ||||||| || | ||||| || | | |||| | ||||| ||||| | | Sbjct 73223 CCATCTTCCAGCCAGCGAAGTGCATGGACGTAATCTTGCCCATGGTTGGCTCTTTCAAAT 73164 Query 113683 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAAT 113742 | || ||| | | || |||||||| ||||| ||||| || || ||||| | || Sbjct 73163 G--GATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCGGCGGCCATTTGGAT 73106 Query 113743 CACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 | || ||| | ||| | ||||| || || |||||||| |||||||||| ||||| Sbjct 73105 GA--TCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTAATATCAGCTGGG 73048 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || | | || |||||||||||||| || | || || | |||||| | | | Sbjct 73047 ATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTGTTCTTCATGTTGTCT 72988 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 113917 ||||| ||||||| | || |||| |||| || | ||||| || || Sbjct 72987 GACCATAGACCAAGATCAACAAGGTCCTT---GAGAAGCCAAGGGTTGACGACTTGGAAT 72931 Query 113918 TCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 113976 || || || | | || | ||| ||||| |||| |||||||||||| |||||||| || Sbjct 72930 TCGCCAGCCAAGACTCGACG-AGAGTAGATGTTGGACGTGTATGGCTCGAAGCACTCGTT 72872 Query 113977 GTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036 ||| ||||| || || | ||| || || || ||||| || || | ||| || ||| || Sbjct 72871 GTTGCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAACGAGGAGCGAGTTGCG 72812 Query 114037 GAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTC 114094 | ||| | | || |||| | | ||||||||| | || | | || Sbjct 72811 AACACCATGCTGAGCGATCTTCGCCTTCAAGCTGTCCCAGTCCCAAA-GATCGGTAGGTG 72753 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 || | | ||| | ||| |||| || ||||||||| ||||| || ||| ||||| Sbjct 72752 TCACTCC-CCAGAGATCGTACTGAAGCTGGCCTTGGGAGATCGGCGAGCCTTCATATGTC 72694 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTCGG--AGCTCGCCTC--GAGG-----GCTGCG 114205 || || || ||| | || ||||| ||||||| | | || || ||| Sbjct 72693 TCATAAGGACCC---AGCTG------TTCGGCGAGCTCGCATGATGCGGTCAATGCAGCG 72643 Query 114206 TGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 114265 || || || ||||| || || || |||| ||||||||| ||| || || | Sbjct 72642 TGGTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGGGATTCGAATGGC 72583 Query 114266 AGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 114323 ||||| | | || || |||| |||||||||||||| ||||| || || || |||| Sbjct 72582 AGTCGAAGTGCCAAGAAAG--CATCAGCGAGACCTTGGACGCCGAGACCGATAGGCCGAT 72525 Query 114324 GTCTCATATTAGACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTA 114382 |||| | || ||| || ||| ||| || || | || | || |||| | | Sbjct 72524 GTCTAAAGTTGCTCTTCTTGGCT-TCTGGCACTGGGTAGTAGTTGATCTCAATAATCTTG 72466 Query 114383 TTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGA 114442 || | || ||||| | |||| || |||| || || || | || | ||| Sbjct 72465 TTCAAGTTCTTGGTCATGACCTGGATGGTTTCGTGGAGACGACCGAAGTCGTA-CTGACC 72407 Query 114443 GTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 || | || | ||| | || || |||| || |||||||| || |||| ||| Sbjct 72406 CTCGTTTTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACAGCAACCTC 72347 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 || | |||||||||| | ||| || || ||||| || || ||| |||||||| | Sbjct 72346 GTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATGGTGCCAAG 72287 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621 |||||| || || |||||| |||| || |||||||||||||||||| | || | ||||| Sbjct 72286 GTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGGTTGCCCGT 72227 Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG- 114679 ||| ||||| | | | ||||| | ||| | | || | | || || ||| || | Sbjct 72226 CTCTGTTTGTGCTTCCAAGATAGCATACCACAGCTTCTGTGCCT-TCATAGT-TTGTCGA 72169 Query 114680 GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCT 114739 |||| || ||| |||||| || | | || ||||| ||||| || || | ||| Sbjct 72168 CCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTGCTTCGAACTCGTCGCCATAGCAGTCT 72109 Query 114740 GAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGC 114799 || || || || |||| || |||||||| |||| ||| | || ||| || ||| Sbjct 72108 GATAGACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCAGTCTTGGTTCTTCTCCACTCGC 72049 Query 114800 TTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCA 114859 |||||||| | || |||||||| ||||| |||| | ||| ||| | | | || || Sbjct 72048 TTCATGAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAACCTCCTCC 71989 Query 114860 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 114919 | || ||||| || | | || || || | | ||| || ||||| || || || Sbjct 71988 TTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGA 71929 Query 114920 TACACCGCGATTGACCC----CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGC 114975 || | |||| | || || | |||| | || | ||||| | || ||| Sbjct 71928 TAGATGGCGAAGGCGCCAGGTCTCTTG-TTACCACCTTGATCGACATAGCGGGCGGTGTT 71870 Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TA 115033 | ||| || | |||||| || | || ||| | ||| || || || || || || Sbjct 71869 GTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTA 71810 Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093 ||| | | |||| || | || | | || |||||| || || || |||||| Sbjct 71809 TGAGCC--GGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTTTGAG 71752 Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153 || || || | ||||| || ||||||| || || || ||||| |||| | || Sbjct 71751 ATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCATGTCG 71692 Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213 || |||||||| |||||||||| |||||| || |||||||| || || || | Sbjct 71691 ATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAG 71632 Query 115214 GCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCT 115273 || || | ||||| ||||||||| | ||||||||| | | | |||||| Sbjct 71631 GCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCG 71572 Query 115274 TCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATA 115333 || |||||||| || | ||||| ||||||| ||||| ||||| | ||| | | Sbjct 71571 TCTCCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCCTCTCCCAGACTTTT 71512 Query 115334 CCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 || || || ||||||| ||||||||||||||| ||||| || Sbjct 71511 CCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTA 71462 >seq53 Length=169705 Score = 118 bits (130), Expect = 1e-21 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| |||||||||||||| || |||||| || |||||||||||||| |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | ||| || || |||||||| || ||||| || || || Sbjct 76464 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAG 76523 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AACCACTTCATCGCCCACTG 126243 || | |||||||| ||| || | || | | |||| | | | ||| | ||||| | Sbjct 76524 GCGACGAGACGCTGAGCGAATGTGCTC-TCCTTGTCTGAGATCCATCGAAGAGCCCATTC 76582 Query 126244 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||||| ||| |||||| |||| || | ||| || || || || | || ||| Sbjct 76583 GGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTT 76636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349791870800