Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq52 309 3e-79 >seq52 Length=173047 Score = 309 bits (342), Expect = 3e-79 Identities = 1089/1674 (65%), Gaps = 44/1674 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || |||||||| || || || Sbjct 71453 AACTACCAGTACTTTGGCTTCAAGACCTTGGAGAGATCATACCTCCTGAAATATGACGGA 71512 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | || | ||| | || || || |||| ||||| ||| | | || |||||||| || Sbjct 71513 AAAGTCTGGGAGAGGCCCCAGCACATGCTTATGCGTGTCTCTGTAGGCATTCACGGAGAC 71572 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| || | | | | | || |||| | |||| || ||| |||| | Sbjct 71573 GACATTGAAAAGGCCATCGAGACCTACAACCTCATGTCCCAAAAGATGTTTACACATG-C 71631 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || || ||||||||||| || || || |||| ||||| || || ||||| || Sbjct 71632 CTCGCCCACTCTGTTCAACGCAGGCACACCACAAGCACAAATGTCATCTTGCTTCCTCAT 71691 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||||| || || || | ||||| |||||| ||||| | | Sbjct 71692 CGAC-ATGAAGGAAGACTCAATAGAGGGTATCTACGACACTCTCAAGACTTGTGCTATGA 71750 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||||||| | || || || || || | | ||| ||| | | || || | || || | Sbjct 71751 TCTCAAAAAATGCTGGTGGCATTGGTCTGAATGTTCACAAAATCCGAGCTACCGGCTCAT 71810 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||| || || || || |||||||| ||||| || ||||| ||||||| ||| Sbjct 71811 ACATTGCCGGCACTAACGGTACATCCAACGGTCTCGTACCCATGCTTAGGGTCTTTGACA 71870 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || ||||| || || || |||||| | ||| || | ||||| |||||| Sbjct 71871 ACACCGCCCGCTATGTCGATCAAGGTGGTAACAAGAGACCTGGCGCCTTCGCCATCTATC 71930 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||| || || || | ||||| |||| |||||||| ||||| || | Sbjct 71931 TTGAGCCTTGGCATGCCGATGTATTTGAGTTCATGAACCTCCGAAAGAATCACGGAAAGG 71990 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || || || | || | ||||| ||||| ||| | || || | || ||||| | Sbjct 71991 AGGAGGTTAGAGCTCGTGATTTGTTCTATGCTCTGTGGATCCCCGATTTGTTCATGAAGC 72050 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| ||| | ||||| |||||| || || ||||| || || || || | Sbjct 72051 GAGTGGAGAAGAACCAAGACTGGACTCTTTTCTGCCCGAATGAGGCGCCTGGTCTATCAG 72110 Query 94373 ACGTTTGTGG-ATCGCGTTTTGAAG-ACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGG 94429 || | ||| || | || |||| |||| | | ||||| | | ||| | ||| Sbjct 72111 ACTGCTATGGCGACGAG-TTCGAAGCACTT-TTCGAGAAATACGAGAGGGAAGGTCGAGG 72168 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | | |||| | || |||||||||| || ||| |||| | ||| |||| Sbjct 72169 TC-GACAAACTATGAAGGCACAGAAGCTGTGGTATGCTATCTTGGAAGCACAAACAGAGA 72227 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 |||| | || | ||| | | |||||| || |||| |||||||||||| || ||| Sbjct 72228 CGGGCAACCCGTTCATGCTTTACAAGGATGCTTGCAACAGAAAGTCCAACCAGAAGAACC 72287 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || |||||| |||||| ||||||| |||||||||||||| ||| |||| |||| Sbjct 72288 TTGGCACCATCAAGTCCTCGAACTTGTGCACTGAGATTGTCGAGTACACTGCTCCTGACG 72347 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669 || ||||||| || || |||| || || ||| | | ||||| ||| || | | Sbjct 72348 AGGTTGCTGTCTGCAATCTGGCTTCGGTCGCTCTGCCGTCCTTCGT-CGA----CCAAAA 72402 Query 94670 C----GTC--TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 | ||| ||| ||||| ||| ||| | || | | || || ||| Sbjct 72403 CGAGGGTCAGTACGACTTCGGTCG-TCTCCACGA------AACCATCCAGG---TCATGA 72452 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 | |||| |||||| | | || || | |||| |||||| || || || || |||| Sbjct 72453 CCAAGAACTTGAACAAGATTATTGAGATCAACTACTACCCAGTGCCAGAAGCCAAGAAGA 72512 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 ||| | | |||||||| ||||| |||||||||| ||| |||| || || | || Sbjct 72513 GCAACTTTAGACATCGGCCTATCGGTCTCGGCGTCCAAGGTCTCGCTGATGCTTTCTTGG 72572 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 | || ||||| | ||| || || || | |||| | | || ||||| | Sbjct 72573 CACTTCGACTGCCATTCGAATCCCCTGAGGCCAAGCAGCTGAACATTCAGATCTTCGAGA 72632 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || ||| || ||| ||| | | | ||| || | | | || || Sbjct 72633 CCATCTACCACGCTGCATTGACCGCATCATGCGAGCTCGCC-GAACAGCTG--GGTCCTT 72689 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 | || | | || ||||| | || ||| |||||| ||| |||||||| | Sbjct 72690 ATGAGACATATGAAGGCTCGCCGATCTCCCAAGGCCAGCTTCAGTACGATCTCTGGGGAG 72749 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATC-AAACACGG 95081 ||| || | | ||| | |||||||| |||| | | || || | | | | || || Sbjct 72750 TGACACCTACCGATCTTTGGGACTGGGACAGCTTGAAG-GC-GAAGATCGCTCAGCATGG 72807 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 ||| ||| |||| || || || || ||||| || || || || | ||||| | || Sbjct 72808 TGTTCGCAACTCGCTCCTCGTTGCTCCTATGCCAACTGCATCTACCTCACAGATTTTGGG 72867 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 ||||||||||| ||||| || | ||| |||||| | ||| | || || | || || Sbjct 72868 CAACAACGAGTGCTTCGAGCCATACACGTCCAACATCTACTCTCGTCGAGTCTTGGCTGG 72927 Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGG 95261 ||||||| ||| ||||| || || |||||| ||| ||| | ||| Sbjct 72928 CGAATTCCAAGTCGTCAACCCTTGGCTTCTCAAGGACCTTGTTGATCTTGGTCTATGGTC 72987 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCA 95318 ||||| | |||||| | | | |||| | |||||| |||| ||| ||||| | Sbjct 72988 AGACAACATGAAGAACAGAATCAT---CGCCGATGGAGGCTCCATCCAAAACGTCCCGAA 73044 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || | || || ||||| |||||||||||||| ||||||||| | || || Sbjct 73045 CATCCCAGCTGATATTAAGGCCCTCTACAAGACCGTCTGGGAGATCTCACAACG 73098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720046139600