Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq144 125 7e-24 seq53 105 6e-18 seq130 93.3 4e-14 >seq144 Length=62325 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || |||||||| || || ||||| |||| | Sbjct 23496 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTC 23437 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| |||||| | || | || || || ||||| || Sbjct 23436 AAGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGA 23377 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||| | | |||| |||||| || |||||| Sbjct 23376 ATGCCCTCCTTGTCCTGGATCTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACC 23317 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| || || || || || || |||||||| Sbjct 23316 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23270 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| |||| ||| ||| || ||||| ||||| ||| | || ||| ||| || Sbjct 24162 ACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCATCCTCC 24103 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || || ||||| |||| |||||||| ||||| || || || ||||||||||| Sbjct 24102 AATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGA 24043 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||||| ||||| | | |||||| | | |||||||| | || | || || Sbjct 24042 ATCTTGGACTTGACGTTGT-CAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTT 23984 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || |||||||||||||| Sbjct 23983 TCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 >seq53 Length=169705 Score = 105 bits (116), Expect = 6e-18 Identities = 291/441 (66%), Gaps = 19/441 (4%) Strand=Plus/Minus Query 47146 TCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACA 47205 |||| || || ||||||||| | |||||||| ||| ||||| | || || | Sbjct 76527 TCGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGC 76468 Query 47206 TGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACG 47265 | || | ||| | ||||| || || || || |||||| || ||||| |||||| Sbjct 76467 TCAAGAAGCGAGGTCTCATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACG 76408 Query 47266 AAGGCCTGCACACCAACTTTGCCTG------TCTCTACTACAACA-CTAGAGTCGATCAA 47318 | ||| ||||||| |||| || || ||||| | || || | | ||| ||||| Sbjct 76407 AGGGCATGCACACTGACTTCGCATGCCTCCTTCTCTCCCACCTCAACCACCGTCCATCAA 76348 Query 47319 AAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 | ||| || || | | | ||| | ||| ||||||| ||| ||| ||| Sbjct 76347 A----GGATGT---CATTGAGAAAGTCATCAT---CGAGGCCGTCGGCATCGAGCAGGAA 76298 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 || | | || || || |||| || | |||| |||||| | |||| || Sbjct 76297 TTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGGCATGAACCATACCCTCATGAAGCAG 76238 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTA-TCCCAAGATTTACCA 47497 || ||||| || ||||||||||| ||| | || |||| | | ||||||| ||| | Sbjct 76237 TATATCGAGTTCGTCGCCGACCGACTGTTGGT-CAGCATGGGCAATCCCAAGTACTACAA 76179 Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557 | || |||||||| || ||| | ||||| || || | |||||||| ||||| || Sbjct 76178 GGCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGCAAGACTAACTTCTT 76119 Query 47558 CGAGAAGCGCGTCGGCGAATA 47578 ||||||||||||||| || || Sbjct 76118 CGAGAAGCGCGTCGGTGATTA 76098 >seq130 Length=70983 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| |||||||||||||||| ||||| || || ||||||||| Sbjct 38025 TCTTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTG 38084 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | |||||| || | ||| | Sbjct 38085 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATG 38144 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAA 127104 || ||||| || || || || || || Sbjct 38145 GTCTTGCCCGTGAGGGTCTTAACGAA 38170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497768682400