Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq53 289 3e-73 seq144 150 2e-31 seq130 113 5e-20 >seq53 Length=169705 Score = 289 bits (320), Expect = 3e-73 Identities = 561/822 (68%), Gaps = 17/822 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || ||||| || || ||| ||| ||| | ||| || || || |||||| Sbjct 76113 TTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG 76172 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||||| ||||| |||| || | ||| | ||| | |||||| |||||| Sbjct 76173 GTAGCCTTGTAGTACTTGGGATTGCCCAT---GCTGACCAACAGTCGGTCGGCGACGAAC 76229 Query 132742 TCGATGTATTGCGACATG---GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCT 132798 ||||| || ||| |||| || | | || | |||| |||| || || || ||| Sbjct 76230 TCGATATACTGCTTCATGAGGGTATGG---TTCATGCCCAACAGAGCGACGGGGAGGGCT 76286 Query 132799 TCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCC 132858 || || || || ||||||||| |||| || ||| ||| || || | || | || Sbjct 76287 TCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGATGACTTTCTCAATGACATCC 76346 Query 132859 GCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 || || || | || || | | ||| || ||||| |||| |||| Sbjct 76347 TTTGATGGACGGTGGTTGAGGTGGGAGAGAAGGAGGCATGCGAAGTCAGTGTGCATGCCC 76406 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | ||| |||||||||||| ||| || | || |||||||| || || || ||| Sbjct 76407 TCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTCTTG 76466 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| ||| || ||| || ||||| | ||||||||||| || || || Sbjct 76467 AGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAGGCG 76526 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || || |||| |||| ||| || ||| | |||||| || || |||||||||||| Sbjct 76527 ACGAGACGCTGAGCGAATGTGCTCTCCTTGTCTGAGATCCATCGAAGAGCCCATTCGGCC 76586 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCT-CTTCCGA 133157 || | ||| || || || || ||||| |||| |||| | |||| ||| | Sbjct 76587 TTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTTCTGCTTTTGC 76646 Query 133158 GGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGC 133217 |||||| ||||| ||||| ||||| || ||||| | ||||||||| Sbjct 76647 TCCTT-CACGTATGTGTCAATGAGCAAGCTGTACATCTCGGAGTGGATGTTCTCCATCAT 76705 Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| || ||||| || ||||| || || ||| || || ||||| || ||| ||||| Sbjct 76706 GATCTGGAAGCCATAGAAGCATCGAGCTTCGGGAACTTGGACTTCACCAGAGAAGCGCTC 76765 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || || || ||||||||||||||||| ||| ||||| ||||| |||||||| ||| Sbjct 76766 GAGGAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCGAGCACGTGGGAGAT 76825 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||||| || || | |||||| | | | ||||||| | ||| ||||||||||| Sbjct 76826 GAAATAACGTTCATCGTCGTTGAGCTTGTTGTGCCAGTCGTGGAGGTCTTTGGACAGGTC 76885 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 |||||||| | ||||| ||||| || | ||| | ||||| Sbjct 76886 GACCTCCTCAGCAGTCCAGAACGAAGCTTGAGCTCTCTTGTA 76927 >seq144 Length=62325 Score = 150 bits (166), Expect = 2e-31 Identities = 168/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| ||||||||| | || |||||| | Sbjct 23267 AAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCT 23326 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | ||||| | | | || | |||||| || |||| ||||| ||||| |||||| ||| Sbjct 23327 AGCGACACCATCGATAATG--TAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCG 23384 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 ||||||| || || |||| ||| || |||||||| || || | |||||| | | ||||| Sbjct 23385 ACCAACAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACT 23444 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||| || || | || || || |||||||| ||| Sbjct 23445 ACAACATCCAGAAAGAGTCAACCCTCCACTTGGTGCTCCGT 23485 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || |||||||||||||| |||| || || || || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || ||||||| ||||| || || ||||| |||||||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 38421 ||||| || || | ||| ||||| || || || |||| || ||| |||| ||||||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCA--GACTACA 23903 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||||| |||| |||| ||| | || |||| || Sbjct 23904 ACATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGG 23952 Score = 118 bits (130), Expect = 1e-21 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| |||||||| |||| || ||| | || Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | ||||| || |||||||| | |||| Sbjct 23558 GACACTATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACC 23615 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | || || | ||| ||||| ||||| || |||| || |||||| |||||||| Sbjct 23616 AGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACA 23675 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || |||||| | ||||| ||| Sbjct 23676 ACATCCAGAAGGAGTCCACCCTGCATCTTGTGCTTCGT 23713 >seq130 Length=70983 Score = 113 bits (124), Expect = 5e-20 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || |||||| || | |||| | | Sbjct 38170 TTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATC 38111 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| || || ||||||| ||||| Sbjct 38110 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGAT 38053 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || |||| || |||||| ||||||||||||||| | Sbjct 38052 TGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAACATCCAGA 37993 Query 38431 AGG 38433 ||| Sbjct 37992 AGG 37990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169611398400