Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq144 95.1 5e-14 seq40 84.2 9e-11 >seq144 Length=62325 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || ||||| || || |||||| | || || ||||| || Sbjct 23954 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCA 24013 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || |||||||| ||||| || ||||| || |||||| Sbjct 24014 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCAA 24073 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || ||||| || | || || ||| | || ||||| | ||| | | || || || Sbjct 24074 CAGCGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAAC 24133 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| || || ||| | || | ||||||||||| Sbjct 24134 ATTCAGAAGGAGAGCACGCTACACCTGGTTCTCCGACTGAGAGGA 24178 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || || ||||| || || || Sbjct 23270 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTAGC 23329 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || || ||||| || ||||| || || ||| Sbjct 23330 GACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAA 23389 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | |||||| | || ||||| ||||||||||| | || ||| || || || Sbjct 23390 CAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACTACAAC 23449 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || |||| || ||||| || Sbjct 23450 ATCCAGAAAGAGTCAACCCTCCACTTGGT 23478 >seq40 Length=192906 Score = 84.2 bits (92), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 451234 AACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 |||||| ||||||| || |||| |||||||||| || ||||| || || || Sbjct 190361 AACTTTCACTCCTGAGGAGGTTTCCGCTATGGTTCTCGGCAAGATGAAGGAGGTCGCTGA 190420 Query 451294 ACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGA 451353 | ||| |||| | || || | || || |||| || || ||||| ||||| || Sbjct 190421 AGCCTATGTTGGCAAGCAGGTCACACACGCCGTCGTTACCGTCCCAGCTTACTTCAACGA 190480 Query 451354 TGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAA 451412 ||| || || || || || ||||||||||| ||| || |||||||| | ||| || ||| Sbjct 190481 TGCCCAGCGACAGGCGACGAAAGATGCAGGCACA-ATCGCTGGTTTGACTGTGCTGCGAG 190539 Query 451413 TTATTAATGAACCTACAGCAGCTGC 451437 || | || || || || || || || Sbjct 190540 TTGTCAACGAGCCAACTGCTGCCGC 190564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975705489915080