Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq33 152 4e-31 seq40 89.7 4e-12 >seq33 Length=207680 Score = 152 bits (168), Expect = 4e-31 Identities = 304/446 (68%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 || || || ||| ||||||| || | |||||| | || |||| || ||||| || | Sbjct 81054 TCGATACCCTCGTACAAAGAGTCGATTTCAATGGATGTCTGAGCAGAGGAAGAAAGAGTT 80995 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAA 517971 || || ||||| || || || || | |||| ||| | ||| ||| | | || | | Sbjct 80994 CGCTTGGCACGCTCGCAAGCAGTGCGGAGTCGTCGCAGTGCTCGTGC-GTTGGAGCTGAG 80936 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 || |||| |||||||||||| || | ||| | | ||||| || || || || Sbjct 80935 GTCGCGCTTATGTTTTCTCTTGAATTCGTTAACGAAGTGGTTGACAAGTCGGTTGTCGAA 80876 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 |||||||| ||||| | ||| | || | || | | |||||| || | || || || Sbjct 80875 GTCTTCACCACCCAAGTGAGTGTCACCAGCGGTCGATTTTACTTCAAAGATGCCCTCCTC 80816 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 | | | || | |||||| || |||||||||| || ||||| || ||||| | Sbjct 80815 GATTGTGAGGAGTGATACATCGAAAGTACCACCACCCAAGTCGAAAATGAGGACATT--T 80758 Query 518152 TTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 || || || || || |||||||| || |||| |||||||| ||||| || || Sbjct 80757 CGCTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTTGGCTCGTTG 80698 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || |||| | ||| || |||||||| || || || || || ||||||||||| || Sbjct 80697 ATGATTCGGAGAACGTTGAGACCAGCGATCAGACCGGCGTCCTTGGTGGCTTGTCTCTGC 80638 Query 518270 GAATCGTTAAAATATGCAGGAACAGT 518295 || ||||| || ||||| |||||||| Sbjct 80637 GAGTCGTTGAAGTATGCTGGAACAGT 80612 >seq40 Length=192906 Score = 89.7 bits (98), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| ||| |||| || || || | ||| ||||||||||| | || |||| |||||| || Sbjct 191501 TTTGTCACCGGCCGTAACCTTTAAAATTCCATTGGCATCGAGCTCGAATGAGACTTCGAT 191442 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 ||| ||||| |||| | | ||||||||| || || | ||| | || ||| | || Sbjct 191441 TTGCGGGACGCCTCGTGGGGAAGGTGGGATACCAGTCAGTTCGAATTTGCCGAGAATGTT 191382 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT 517410 || ||||| || | ||||||||||||||| | ||||| Sbjct 191381 GTTGTCTTTGGTCATGGATCGTTCACCCTCGAAGACCTGGAT 191340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780797092120060