Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq33 412 4e-110 seq40 145 1e-29 seq19 140 4e-28 seq131 100 4e-16 >seq33 Length=207680 Score = 412 bits (456), Expect = 4e-110 Identities = 791/1158 (68%), Gaps = 20/1158 (2%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| || || ||||| || ||||| Sbjct 81327 TCACCAGACAGGATAGCAGCCTGGACAGCAGCACCGTAGGCAACAGCCTCGTCAGGGTTG 81268 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | | | || ||| | ||| Sbjct 81267 ATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACGAGCTTCTGGATTCTTGGG 81208 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 ||||| || || ||||| ||||| || || || | ||| | || || || ||||| | | Sbjct 81207 ATTCGGGTAGAACCACCAACCAAGACAATCTCGTGAACTGTTGACTTGTCAATCTTGGCG 81148 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCAT---ACATTTACGGAACAAGTCCATACACAGT 7246 || ||||| ||||| || ||||| | || ||||| | |||| || || Sbjct 81147 TCACGAAGGACACGCTCGACTGGCTCCATGGTAGAT---CGGAAGAGGTCCTGGCAGAGC 81091 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 |||||||| | |||||||| |||||||| ||||| || | || ||||| || || || Sbjct 81090 TCCTCAAATCTGGCACGGGTGATGGATGTGTAGAAGTCGATACCCTCGTACAAAGAGTCG 81031 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 |||||||||| ||| || || | ||||| | |||||||| || ||||| || || || Sbjct 81030 ATTTCAATGGATGTCTGAGCAGAGGAAGAAAGAGTTCGCTTGGCACGCTCGCAAGCAGTG 80971 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | || || || || || | ||| | | || ||||||||| | || || Sbjct 80970 CGGAGTCGTCGCAGTGCTCGTGCGTTGGAGCTGAGGTCGCGCTTATGTTTTCTCTTGAAT 80911 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | | |||||| | |||| ||||| ||||||||||||||||| || || Sbjct 80910 TCGTTAACGAAGTGGTTGACAAGTCGGTTGTCGAAGTCTTCACCACCCAAGTGAGTGTCA 80851 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||||| ||| ||||||||||| || | || || | | | || ||||| || Sbjct 80850 CCAGCGGTCGATTTTACTTCAAAGATGCCCTCCTCGATTGTGAGGAGTGATACATCGAAA 80791 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 ||||||||||||| ||| |||||||| || || || | || ||||| || ||| Sbjct 80790 GTACCACCACCCAAGTCGAAAATGAGGACATTTCGCTCACCCTCGGCCTTCTTGTCAAGA 80731 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || || || || || ||||| || || || || || ||| ||| || ||||| Sbjct 80730 CCGTAGGCAATGGCAGCAGCGGTTGGCTCGTTGATGATTCGGAGAACGTTGAGACCAGCG 80671 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | || || || || ||||||| ||||| ||||| ||||| || || || || Sbjct 80670 ATCAGACCGGCGTCCTTGGTGGCTTGTCTCTGCGAGTCGTTGAAGTATGCTGGAACAGTG 80611 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 ||||| |||| | ||| | ||| || || |||||||| | ||| |||| ||||| Sbjct 80610 ACGACAGCGTTGTTTACTGTGCCACCAAGGTATGATTCCGCAGTCTCTCTCATCTTGGTC 80551 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAAC 7845 | |||||||| || |||||||| | | || ||| ||| || || || || || || Sbjct 80550 AAGACCATCGACGAGATCTCTTCTGGTGTGAA-TGTCTTCTCCTCGCCCTTGAACTCGAC 80492 Query 7846 TTCAATCATGGGTTTATCCGCAGCACC---GGGGATAACCTTATACGACCAATCTTTCAT 7902 ||| | || || || |||| | ||||||||| | | | | ||||| Sbjct 80491 CGAAATGACTGGCTT----GC--CACCCTTGTCGATAACCTTGAAAGGGAAGTGCTTCAT 80438 Query 7903 ATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 ||| ||||||||| || | ||||| | || || |||||||| || || || || Sbjct 80437 GTCGGCTTGGACCTCAGCATCGGCGAACTTGCGGCCTATCAGACGCTTGGCGTCGAAGAC 80378 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 |||||| | ||||||||||| |||||||| || | ||| || || || | || | Sbjct 80377 TGTGTTGATTGGGTTCATGGCGACCTGGTTCTTTGCAGAGTCACCAATCAGTC--TC-TC 80321 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | || || || || ||| | ||||| || ||||| || || |||||||| ||||| || Sbjct 80320 GGTGTCAGTGAAGGCAACGAAAGATGGTGTTGTTCGGTTGCCCTGGTCGTTGGCAATGAT 80261 Query 8083 TTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 ||| | | ||| | | ||| || ||||| || ||||| || || | ||||||||| Sbjct 80260 TTCGATTCTGTCATCTCTGTAGATACCCACGCAGGAGTACGTGGTACCAAGATCAATACC 80201 Query 8143 GATTGCTTGAGTCATTTT 8160 ||| ||| | | ||| || Sbjct 80200 GATGGCTGGTGCCATATT 80183 >seq40 Length=192906 Score = 145 bits (160), Expect = 1e-29 Identities = 250/360 (69%), Gaps = 5/360 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || || | ||| Sbjct 190730 ATCGAAATCCTCACCACCGAGATGGGTGTCACCTGCGGTGGCAAGGACCTCGAACACACC 190671 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||| | | | || ||||| || ||||| ||||| || || | | || | Sbjct 190670 CTCGTCAACGGAGAGAAGAGAGACATCGAAAGTACCTCCACCAAGATCGTAGACGACGAT 190611 Query 7576 GTTCGTATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | | || | |||| |||| || | |||||| || || || || || ||||| Sbjct 190610 CTGCCTCTCCTTGCCGTCAGACATCTTGTCCAAACCGTAGGCAATCGCGGCAGCAGTTGG 190551 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | || || || ||||| || ||||| || || | |||||||||||||| | Sbjct 190550 CTCGTTGACAACTCGCAGCACAGT-CAAACCAGCGATTGTGCCTGCATCTTTCGTCGCCT 190492 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || | |||||| ||||| || ||||| || ||||| |||| ||||| | ||| | Sbjct 190491 GTCGCTGGGCATCGTTGAAGTAAGCTGGGACGGTAACGACGGCGTGTGTGACCTGCTTGC 190432 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | ||| | ||| |||| || ||||| ||| |||||||| | |||| ||| |||| Sbjct 190431 CAACATAGGCTTCAGCGACCTCCTTCATCTTGCCGAGAACCATAGCGGAAACCTCCTCAG 190372 >seq19 Length=295344 Score = 140 bits (154), Expect = 4e-28 Identities = 343/517 (66%), Gaps = 5/517 (1%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||| ||||| || ||||| || || | ||| || | || ||| | | || Sbjct 230989 CAGGTCCTCGAAACGAGCTCGGGTGATCTGTGCGTTGAAGTCCTCACCATCGAAGAGGGA 230930 Query 7303 ATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGC 7362 || || || | ||| || || | | || || | |||||||| || |||||||| || Sbjct 230929 GTCGATCTCGACGGTGGTCTGAGTGGCAGAGGAGAGAGTTCGCTTGGCACGCTCACAGGC 230870 Query 7363 CGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422 || || | | || || || || | || || || || || || || || || Sbjct 230869 TGTGCGCAGTCTTCGCAGAGCTCGGGCGTCGCCAGACATGTCCTTTTTCGTCTTGCGCGA 230810 Query 7423 AAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||||| | |||||| || || || | | |||||||||| |||||||||||| | Sbjct 230809 GAACTCCTTCTTGAAGTGCTCCAACAGGT-TGGTGTCGAAATCTTGACCACCCAAGTGAG 230751 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || ||||| || ||||| |||| ||| || | ||||| | | || |||| Sbjct 230750 TGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGGAGAGAGACAT 230691 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCT 7598 | || ||||||||||| || || | || ||||| || || | ||| ||| Sbjct 230690 CGAAAGTACCACCACCGAGATCGTAGATCAGTACATTTCGCTCCTTCTCTTGCTTGCCGG 230631 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 | | |||||||| ||||| || || || || || || || || ||||| || ||| | Sbjct 230630 AACCAAGACCGTAAGCGATGGCAGCGGCAGTGGGCTCGTTGATGATACGGAGGACGTTGA 230571 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 | || | || | | || ||||| || ||||||| || ||||| |||||||| | Sbjct 230570 GACCTGAGATGGCACCAGCGTCTTTGGTGGCTTGTCTCTGGTTGTCGTTGAAGTAGGCTG 230511 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 |||| || | ||| || | | ||| ||||| ||||| Sbjct 230510 GGACGGTAATGACGGCCTTCTCGACCTTCTTGCCGAG 230474 >seq131 Length=70815 Score = 100 bits (110), Expect = 4e-16 Identities = 230/342 (67%), Gaps = 12/342 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | || || || || ||| | ||||| || |||| ||| Sbjct 27114 ATCGAAGTCCTCACCACCGAGATGAGTGTCACCGTTGGTAGACTTGACCTCGAAGACACC 27055 Query 7516 TCCTTC--AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| ||| | | | || | ||| || ||||||||||| || || | | Sbjct 27054 --CTTCTGAATCTCCAGGATGGAGATATCGAAAGTACCACCACCGAGATCGTAGACAGCA 26997 Query 7574 ACG-TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | |||| ||| |||| |||| |||||||||| || | || || || || || Sbjct 26996 ATGATTCG----GTCATCTTCCTTCT---CGAGACCGTAGGCAAGCGCAGCTGCGGTCGG 26944 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | | ||| ||| ||| ||||||||||| | ||||| || || ||||| Sbjct 26943 CTCGTTGACGACACGGAGAACGTTGAGGCCAGCAATCTGACCAGCATCCTTGGTGGCTTG 26884 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || ||| ||||| |||||||| ||||| || || || ||| | ||| ||||| || Sbjct 26883 TCTCTGCATGTCGTTGAAGTAGGCTGGGACAGTGACCACACCGTTCTTGATGTTCTTGCC 26824 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 ||| || | || || | || ||||| || |||||||| Sbjct 26823 GAGGTAAGCCTCAGCAGTTTCCTTCATCTTCTGGAGAACCAT 26782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128751028400