Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 109 6e-19 >seq2 Length=541770 Score = 109 bits (120), Expect = 6e-19 Identities = 282/423 (67%), Gaps = 30/423 (7%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||| || ||||| || || | ||||| | || || | ||| | ||| ||| || Sbjct 294162 CGATCAAATCGACCCGGTCGCATGAGAGCCTTGTCTAGGACATCAGGCCTGTTGGTACCG 294221 Query 11563 GCAATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 |||| || || | || | || || ||| |||||||||||| || || | | ||||| Sbjct 294222 GCAAGCACGACGA--CCTGCTCCGATGTGTTGAAACCGTCCATCTCGGTCAAGATCTGGT 294279 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAA------------- 11667 ||| || || ||||| |||||| | ||||| ||| || Sbjct 294280 TGAGTGTGGACTCTCGCTCGTCGTTGCCG------CCACC-GCCAAAGTTTCCCTTGGCT 294332 Query 11668 CGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--C 11725 ||| |||||| | || || || || |||||||| | |||||| || ||| | | | Sbjct 294333 CGCGACTTACCAATGGCATCGATTTCGTCGATGAAGATGATACAAGG--GGTGGTCTTTC 294390 Query 11726 GTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785 || | |||| | || | || ||| | |||||||| ||||||||||| |||| Sbjct 294391 TAGCATTGGCGAACAAGTCCCTCACTCGCGAAGGACCAACACCGACGAACATCTCGACGA 294450 Query 11786 AGTTTGCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 | | | | || ||| ||| |||||| ||| |||||||||||| |||| ||| Sbjct 294451 ACTCGGACCCTGAGACAGAGAA-GAAGGGCACACCCGACTCACCAGCGGTGGCCTTGGCG 294509 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || || |||||||| ||||| |||| ||||| |||| || || ||||| |||||||| Sbjct 294510 AGCAGGGTCTTACCAGTACCCGGTGGACCAGAAAGAATAGCACCTCGGGGAATCTTGGCT 294569 Query 11905 CCA 11907 ||| Sbjct 294570 CCA 294572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972245278000