Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq52 241 2e-58 seq53 113 5e-20 >seq52 Length=173047 Score = 241 bits (266), Expect = 2e-58 Identities = 1136/1779 (64%), Gaps = 49/1779 (3%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTTTG-CCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||||||||| ||| | | || | | |||||| |||||||| || |||||||| Sbjct 73283 TGAACTGAATTGGT-GCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGTCTTGAGA 73225 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGA-CTTTCCAT 105675 || ||||| | | ||||| || | | |||| ||| ||||| ||||| | Sbjct 73224 CCCATCTTCCAGCCAGCGAAGTGCATGGACGTAATCTTGCCCATGGTTGGCTCTTTCAAA 73165 Query 105676 GAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735 | | || | | || || |||||||| |||||| | || ||||| | || Sbjct 73164 TGGATG-TTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCGGCGGCCATTTGGAT 73106 Query 105736 GACATCCTTCATCTTGA--TTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGG 105793 || || ||| | ||| | ||||| || || |||||| ||| |||||| ||||| Sbjct 73105 GA--TCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTAATATCAGCTGGG 73048 Query 105794 ATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTG 105853 || | | || ||||| || || || || | || || | |||||| | | Sbjct 73047 ATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTGTTCTTCATGTTGTCT 72988 Query 105854 GACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCT 105913 ||||| ||||||| | || || |||| || |||||| | || || Sbjct 72987 GACCATAGACCAAGATCAACAAGGTCCTTGAGAAGCCAAGGGTTGACGACTTGGAATTCG 72928 Query 105914 CCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATT 105972 || || | | || | ||| |||||||| | |||||| || || ||||| || || || Sbjct 72927 CCAGCCAAGACTCGACG-AGAGTAGATGTTGGACGTGTATGGCTCGAAGCACTCGTTGTT 72869 Query 105973 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 106032 ||||| || |||| ||| || || |||||||| || || | | || ||| |||| Sbjct 72868 GCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAACGAGGAGCGAGTTGCGAAC 72809 Query 106033 ACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCA 106090 ||| | | ||| |||| | |||||||| | || | | ||| ||| Sbjct 72808 ACCATGCTGAGCGATCTTCGCCTTCAAGCTGTCCCAGTCCCAAA-GATCGGTAGGTGTCA 72750 Query 106091 CCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCA 106150 | | |||| | ||| | |||||| |||||||| | || || || ||| |||||||| Sbjct 72749 C-TCCCCAGAGATCGTACTGAAGCTGGCCTTGGGAGATCGGCGAGCCTTCATATGTCTCA 72691 Query 106151 TAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTT 106210 || | ||| | ||| || | || || || || | ||||| || ||||| Sbjct 72690 TAAGGACCCAGCTGTTCGGCGAGCTCGCATGATGCGGTCAATGCAGCGTGGTAGATGGTC 72631 Query 106211 TCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGC 106265 || ||||| || |||| || |||||| ||| || || |||| || || | | Sbjct 72630 TCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGGGATTCGAATGGCAGTCGAAGTGCC 72571 Query 106266 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 106325 | ||| |||| ||||||||||| || || | ||| ||||| | |||| | | Sbjct 72570 AAGAAAG-----CATCAGCGAGACCTTGGACGCCGAGACCGATAGGCCGATGTCTAAAGT 72516 Query 106326 TAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 106384 | ||| || ||| || || || | || | ||||| | ||| | || Sbjct 72515 TGCTCTTCTTGGCT-TCTGGCACTGGGTAGTAGTTGATCTCAATAATCTTGTTCAAGTTC 72457 Query 106385 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGC-GAGTCTC--- 106440 ||||| | | || || |||| || || | | || || | || ||| Sbjct 72456 TTGGTCATGACCTGGATGGTTTCGTGGAGACGACCGAAGTC----GTACTGACCCTCGTT 72401 Query 106441 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 106500 || | ||| | || || |||| || |||| |||||| ||||| ||| || Sbjct 72400 TTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACAGCAACCTCGTCAGG 72341 Query 106501 ATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 106560 | | |||||||| | ||| || || |||||||| || ||| || || || | ||||| Sbjct 72340 AGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTT 72281 Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620 ||||| |||| ||||||| ||||||||||| |||||| | || | |||||||| || Sbjct 72280 CTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGT 72221 Query 106621 CTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGT 106678 |||| | | || || | ||||| | || | | | | || || || | || Sbjct 72220 TTGTGCTTCCAAGATAGCATACCACAGCTTCTGTGCCTTCATAGTTTGTCG--ACCTCGA 72163 Query 106679 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAG 106737 || ||| |||||| || | | || ||||| ||||| || ||| || ||| || || Sbjct 72162 CCTTCCCTCTCGTATTTCTCGAAAAGTGCTTCGAACTCGTC-GCCATAGCAGTCTGATAG 72104 Query 106738 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 106797 ||| || |||| | || |||||||||| ||| | || ||| || |||||||| Sbjct 72103 ACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCAGTCTTGGTTCTTCTCCACTCGCTTCAT 72044 Query 106798 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC 106857 ||| | || || |||||||| | | || | ||| | | | | |||| || | || Sbjct 72043 GAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAACCTCCTCCTTTCC 71984 Query 106858 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 106917 || || ||| | | | |||||| | | ||| || ||||| ||||||||||||| Sbjct 71983 GTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGATAGAT 71924 Query 106918 TGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTT 106971 |||| || || ||| | ||| |||||| |||||||| || ||| || Sbjct 71923 GGCGAAGGCGCCAGGTCTCTTGTTA---CCACCTTGATCGACATAGCGGGCGGTGTTGTC 71867 Query 106972 AAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGA 107031 ||| || | |||||| || | | ||| | ||| ||| || || || ||| || Sbjct 71866 AAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTATGA 71807 Query 107032 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 107091 | |||| | | || | | || ||||| || ||||| |||||||| Sbjct 71806 GCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTTTGAGATCAT 71747 Query 107092 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 107151 ||||| | | ||||| | |||||||| | |||||||| ||||| || |||| || Sbjct 71746 AGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCATGTCGATGAG 71687 Query 107152 GAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 107211 ||||||| ||||| || | | |||||| || || ||||| || || || | || || Sbjct 71686 GAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATG 71627 Query 107212 AATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 | ||||| ||||||||| || ||| ||||| | | | |||||||| || || Sbjct 71626 TGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCC 71567 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGTATTgggg 107310 ||| ||||| | | |||||||||| ||||| ||||| Sbjct 71566 GTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGG 71528 >seq53 Length=169705 Score = 113 bits (124), Expect = 5e-20 Identities = 190/269 (71%), Gaps = 12/269 (4%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| |||||||| || ||||| || |||||| || |||||||||||||| |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | ||| | || | | || || ||||||||||| |||||||| || ||||| Sbjct 76464 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAG 76523 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATTT 117470 || | || |||| ||||| | || | |||| | | | |||| | ||||||| Sbjct 76524 GCGACGAGACGCTGAGCGAATGTGC-TCTCCTTGTCTGAGATCCATCGAAGAGCCCATTC 76582 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATA---ACTGCTTCT--TT 117525 ||||||||| |||||||| | || | ||| || || || | ||||||||| || Sbjct 76583 GGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTTCTGCTT 76642 Query 117526 TCAGATCCATCCTTAATGTATTTGTCAAT 117554 | | | ||||| | |||| ||||||| Sbjct 76643 T----TGC-TCCTTCACGTATGTGTCAAT 76666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977038872400