Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq144 152 1e-31 seq130 107 4e-18 seq125 104 5e-17 >seq144 Length=62325 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||| ||||| || ||| ||| || ||||| ||||| |||| |||||| Sbjct 24175 TCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGT 24116 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| || | |||||||| || ||||| | ||| ||||| || || ||||| || Sbjct 24115 ACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACC 24056 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||||||||| || ||||||||| ||||||||||| ||| ||| ||||| | Sbjct 24055 CTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAA 23996 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| |||||||| || | ||| || || || | ||||| Sbjct 23995 AGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||||| ||| ||||| | || ||||| || || || ||||| || | || ||||| || Sbjct 23941 TCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCC 23882 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 || ||||| ||||| || |||||||| ||||| |||||||| || ||||||||||| || Sbjct 23881 GTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTT 23822 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||| ||||| |||||| || || || ||||| || ||| ||||| || || | Sbjct 23821 GTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGAT 23762 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| | ||| || || || | |||||| Sbjct 23761 GGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 Score = 123 bits (136), Expect = 6e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 ||| || || |||||||| || || ||||| ||| |||| || | |||||||| |||| Sbjct 23473 GTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAG-GTGCGACCATCTTCAAGCT 23415 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 | ||||| ||||| ||||| ||||||||||| || |||||||| || ||||| || || | Sbjct 23414 GTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCT 23355 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | ||| || || || |||||||| | || || |||||||| | ||||| || | Sbjct 23354 TGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGTCTTGCCAG 23295 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 | | || || ||||| | ||||| Sbjct 23294 TGAGGGTCTTGACGAAGATCTGCAT 23270 >seq130 Length=70983 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || |||| || |||||||||||||| || |||||||| Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||| || ||||| || || || || || ||||| || || || |||||| || || Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 38111 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || || || |||||||| | ||||| || || | || || ||||| Sbjct 38112 ATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGAA 38170 >seq125 Length=76066 Score = 104 bits (114), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| || | |||||||| ||||| ||| Sbjct 47329 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTTCGGCCATCCTCG 47388 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| | ||| || ||||| || || |||||||| |||||| Sbjct 47389 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCT 47445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474350231170