Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq144 105 4e-18 seq130 87.8 1e-12 >seq144 Length=62325 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||| | | ||||| ||| | ||||| || ||||||||||| ||||| ||| Sbjct 24180 CCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 24121 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||| || || || ||||| |||| ||| || || || | || Sbjct 24120 AGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGA 24061 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| |||||| | || | || | || || Sbjct 24060 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACT 24001 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| ||||| || |||||||| ||||| ||||||||| Sbjct 24000 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCATA 23953 Score = 95.1 bits (104), Expect = 8e-15 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831 |||||||| | || |||||||| ||||| ||||| | |||| | || |||| || Sbjct 23478 ACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGG-TGCGACCATCTTC 23420 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || || || || || ||||| ||||| | || | ||||||||||| Sbjct 23419 AAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTG 23360 Query 34892 AATCTT-CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATG 34946 ||||| || ||| || || ||||||| || | | ||| || || | ||| ||| Sbjct 23359 GATCTTGCTCTTT-AC--AT--TATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATG 23305 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || || || ||||| ||||| || ||||||||||| || || Sbjct 23304 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTTGGT 23264 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| |||| | || || ||||| || || || || Sbjct 23688 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCAAGCTGCTTGCCAGCGAAG 23629 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| |||||||| | || | || |||||||| |||||| |||||| Sbjct 23628 ATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTG 23569 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| |||| || ||||| || || || | |||||||| Sbjct 23568 TCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACG 23509 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 23508 AAGATCTGCATA 23497 >seq130 Length=70983 Score = 87.8 bits (96), Expect = 1e-12 Identities = 131/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| |||| | || || ||||| |||||||| || || Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 | ||| |||||||| | || | ||||||||||| ||||| ||||| || | Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT--T 38107 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || || ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 38108 GTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAAC 38167 Query 34970 AAAG 34973 ||| Sbjct 38168 GAAG 38171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631582199280