Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq144 87.8 1e-11 >seq144 Length=62325 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || |||||||| ||||| ||| | ||| || ||||| || | || ||| Sbjct 23716 GAGACGAAGCACAAGATGCAGGGTGGACTCCTTCTGG--ATGTTGTAGTCGGAGAGGGTT 23659 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||||| || || || || || || ||||| ||||| ||||||||||||||| Sbjct 23658 CGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCT 23599 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 || || || ||||| || || || || || || || | ||| | | ||||| Sbjct 23598 TCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTC-GGATGACTCAACCTCGAG 23540 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | || || ||||| | || || ||||| || |||||| Sbjct 23539 AGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATA 23497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029269028899900