Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq53 260 3e-64 >seq53 Length=169705 Score = 260 bits (288), Expect = 3e-64 Identities = 570/844 (68%), Gaps = 20/844 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 76094 CTGGTAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTC 76153 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCAT-CTGTTCCAGCA 47957 ||||||| ||| ||||||| | || || | | |||||| ||| ||| || Sbjct 76154 CATGAAGTCGAATGGGTTGGTAGCCTTGTAGTACTTGGGATTGCCCATGCTGA-CCAACA 76212 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| ||||||| || | ||||||||| ||||||||| | || | Sbjct 76213 GTCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATGGTTCATGCCCAACAGAG 76272 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| | || | || || || |||| ||| || ||||| || | | | Sbjct 76273 CGACGGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGATGACTT 76332 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGA-GCATGCAGGCA 48136 || || | || ||| || || | ||||| | | ||| | | ||| || Sbjct 76333 TCTCAATGACATCCTTTGATGGACGGTGGTTGAGGTG----GGAGAGAAGGAGGCATGCG 76388 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| ||| ||||| ||| |||||| ||||||||||| ||||| ||| Sbjct 76389 AAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGC 76448 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | || ||||||||||| || | || || ||||| |||||||| || ||| Sbjct 76449 ATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCC 76508 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 || || || || || ||| ||| | || |||| | | ||||||||||||||| Sbjct 76509 TCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAATGTGCTCTCCTTGTCTGAGATCCAT 76568 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 ||| ||||| || ||||||||| |||| ||||| || || || || || ||| || Sbjct 76569 CGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGG 76628 Query 48377 TTCTTGCACT-CACCTGCGTCCGCAACATAGGT---AGTGAGC-AGCTTTGCGTACATCT 48431 | || || | ||| ||| || || || | ||||| |||| |||||||| Sbjct 76629 TACTGCTTCTGCTTTTGC-TCCTTCACGTATGTGTCAATGAGCAAGCT----GTACATCT 76683 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 | ||||| | ||||| || ||||||||| || |||||| | || || || | Sbjct 76684 CGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCTTCGGGAACTT 76743 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 | ||||| ||||| | ||| || || ||||| ||||| || || || || ||||| | Sbjct 76744 GGACTTCACCAGAGAAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGA 76803 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGC 48608 ||||||| || || || | ||||| || || | || | |||| || |||| Sbjct 76804 AGAAGGCGAGCACGTGGGAGATGAAATAACGTTCATCGTCGTTGAGCTTGTTGTGCCAGT 76863 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | || | ||||||| |||||| || || || |||||||||| || || | ||| | | Sbjct 76864 CGTGGAGGTCTTTGGACAGGTCGACCTCCTCAGCAGTCCAGAACGAAGCTTGAGCTCTCT 76923 Query 48669 TGTA 48672 |||| Sbjct 76924 TGTA 76927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526861478400