Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq52 172 1e-37 seq53 161 2e-34 >seq52 Length=173047 Score = 172 bits (190), Expect = 1e-37 Identities = 853/1321 (65%), Gaps = 49/1321 (4%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCG-TCAGGGC 221424 || || || | ||| || ||||| | ||||||| | |||| || |||| ||| || Sbjct 72705 CCTTCATATGTCTCATAAGGACCCAGCTGTTCGGCGAGCTCGCATGA-TGCGGTCAATGC 72647 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484 |||||||||||||||||| |||||| |||| || ||||||||| || || ||| Sbjct 72646 AGCGTGGTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGGGATTCGAA 72587 Query 221485 GGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 |||| || || | ||||| | || || || || || || |||| |||||| |||| Sbjct 72586 TGGCAGTCGAAGTGCCAAGAAAG-CATCAGCGAGACCTTGGACGCCGAGACCGATAGGCC 72528 Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603 ||||| |||| ||||||||||| || || |||||| || || | | Sbjct 72527 GATGTCTAAAGTTGCTCTTCTTGGCTTCTGGCACTGGGTAGTAGTTGATCTCAATAATCT 72468 Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACC- 221662 |||| | |||| || ||||| | | ||| ||| | || || ||| Sbjct 72467 TGTTCAAGTTCTTGGTCATGACCTGGAT------GGT----TTCGTG-GA--GACGACCG 72421 Query 221663 AACTCG--CCG-CCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 || ||| | | || |||| || || || || | || || || ||||| Sbjct 72420 AAGTCGTACTGACCCTCGTTTTGG---TCGACGAAGGACGGCAGAGCGACCGAAGCCAGA 72364 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || || || || |||||||| || |||| | ||||| || || | ||| | Sbjct 72363 TTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAG 72304 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 |||||||||| || |||| || || || ||||| | ||| ||| |||||||| ||| Sbjct 72303 GACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGC 72244 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GC 221898 || || || ||| ||||| || || ||| || | ||| || | |||| || Sbjct 72243 ATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGCT-TCTGTGC 72185 Query 221899 GCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAA 221957 ||| || | | ||| | ||| || ||| | | | || | || || | | | Sbjct 72184 CTTCATAGTT-TGTCGACCTCGACCTTCCCTCTCGTATTTCTCGAAA-AGTGCTT--CGA 72129 Query 221958 ACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG--CGGGACACATCAGACTCCA 222015 ||| || || || || || || || | ||| |||| || | ||| |||| Sbjct 72128 ACTCGTCGCCATAGCAGTCTGATAGACCAGG-CGCCTCATTCGGG-CAGAAAAGAGTCCA 72071 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 || | ||| | | || | || |||||| | || ||||||||||| || | || | Sbjct 72070 GTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAACAA 72011 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | | | ||||||| |||| || || | || | || |||||||| | Sbjct 72010 ATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATAC 71951 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 || || ||||| ||||| ||||||| ||| | ||||| |||| |||||| ||||| || Sbjct 71950 ATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCACCTTG 71891 Query 222196 ATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 ||| || || | | | || |||| | ||| | ||||| || ||||||||| Sbjct 71890 ATCGAC-ATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATG 71832 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGA 222314 |||||| ||||| |||||| | ||| || | | || || || || | Sbjct 71831 TACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAA 71772 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 | ||||| || | ||| |||||||| || || ||||||||||||| ||| ||||| | Sbjct 71771 TGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTA 71712 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT-TGGTGGAACAG 222433 | ||||| ||||| | || | || || ||||| ||||| || | || |||| | | Sbjct 71711 TTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGT-GTGCCT 71653 Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCGTACGT 222492 ||||| ||||| ||||| ||| |||||||| | | | ||||| || | ||| || Sbjct 71652 GCGTTGAACAGAGTGGGCGAGGCATGTGTAAA-CATCTTTTGGGACATGAGGTTGTAGGT 71594 Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCATCTCATGTACATG 222550 ||| | | | | | |||| ||| |||||||| || || | | | ||| |||| Sbjct 71593 CTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACA--GAGACACGCATAAGCATG 71536 Query 222551 TACTGGGGCCTCTCCACAGGACCCTT--GGAGCTGGAGAGCAGGTACGATTTTTCCAGAG 222608 | ||||||||||||| || ||| || | || ||||| ||| | |||| | Sbjct 71535 TGCTGGGGCCTCTCC-CA-GACTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAAGG 71478 Query 222609 TCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCT 222668 ||||||| |||||||| | | || ||||| | | ||| || | ||| | || |||| Sbjct 71477 TCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCAGAGTTGAGCT 71418 Query 222669 C 222669 | Sbjct 71417 C 71417 >seq53 Length=169705 Score = 161 bits (178), Expect = 2e-34 Identities = 560/853 (66%), Gaps = 40/853 (5%) Strand=Plus/Minus Query 25489 TACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATG 25548 ||||||| |||||| || |||||| || || ||| | || ||| |||| ||| | Sbjct 76927 TACAAGAGAGCTCAAGCTTCGTTCTGGACTGCTGAGGAGGTCGACCTGTCCAAAGACCTC 76868 Query 25549 GACGGCTGGTACGCTCTATC-CAAAGACGAGCAGCATTTTCTCAAGT---ACGTGTTGGC 25604 ||| |||| || | | | ||| ||||| | | || | ||| | ||||| | || Sbjct 76867 CACGACTGGCACAA-CAAGCTCAACGACGATGAACGTTATTTCATCTCCCACGTGCTCGC 76809 Query 25605 ATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGA 25664 ||||| || |||||||| || || || |||||||| || |||| | ||| | | || Sbjct 76808 CTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTCCTCGAGCGCTTCTCTGGTGA 76749 Query 25665 AGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGC 25723 ||| || || | | || | | || ||||| || |||||||| || || || | | Sbjct 76748 AGTCCAAGTTCCCGAAGCTCGA-TGCTTCTATGGCTTCCAGATCATGATGGAGAACATCC 76690 Query 25724 ACTCTGAGGTGTATGCCAAGCTT-CTGAT-GACGTACATTACAGACGTCGCCGAGAGAGA 25781 |||| ||| |||| ||||| || || ||| |||| || | || | ||| Sbjct 76689 ACTCCGAGATGTAC----AGCTTGCTCATTGAC--ACATACGTGAAGGAGCAAAAGCAGA 76636 Query 25782 T-CGG---CTGTTTGGTGCCATCGAGCACATACCCA-GCATCAAGAGGAAGGCGCGGTGG 25836 | | ||||| | || ||||| |||| |||| | |||| || |||||| ||| Sbjct 76635 AGCAGTACCTGTTCGACGCTATCGA-CACAATCCCATGTATCAGGAAGAAGGCCGAATGG 76577 Query 25837 GCCATGAAGTGGATCAACAGCCA--GAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 || | |||||| ||| || ||| || || || | |||| || || ||||||| Sbjct 76576 GCTCTTCGATGGATCT-CAGACAAGGAGAGC-ACATTCGCTCAGCGTCTCGTCGCCTTTG 76519 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 |||| || ||||| || || ||| ||| |||||||| ||||||||||||||||| || Sbjct 76518 CTGCCGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGC 76459 Query 25955 AGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCC 26014 || |||||| || || ||| |||||||| |||||| | | |||||||| | | Sbjct 76458 GAGGTCTCATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACGAGGGCATGC 76399 Query 26015 ACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC-TCAAGAG 26073 ||| || || || ||||| || | | |||| ||| || | | | | |||| || Sbjct 76398 ACACTGACTTCGCATGCCTCCTTCTCTC---CCAC---CTCAACCACCGTCCATCAA-AG 76346 Query 26074 ACCGTC-TACAGTA--TCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130 ||| | || | |||||| ||||| || | |||||| |||| || | Sbjct 76345 GATGTCATTGAGAAAGTCATCATCGAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAA 76286 Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190 ||||||||||| | | ||||||| || || || |||| Sbjct 76285 GCCCTCCCCGTCGCTCTGTTGGGCATGAACCATACCCTCATGAAGCAGTATATCGAGTTC 76226 Query 26191 GTGGCCGACCATCTGCTGTGCCAGC-TGGG-ACTCGCCAGACTCTACAGTACGCCTAACC 26248 || ||||||| ||| || | |||| |||| | || ||| ||||| | | |||| Sbjct 76225 GTCGCCGACCGACTGTTG-GTCAGCATGGGCAATC-CCAAGTACTACAAGGCTACCAACC 76168 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || ||| || ||||| |||||||| || ||| | | Sbjct 76167 CATTCGACTTCATGGAGAACATCTCCCTGGCCGGCAAGACTAACTTCTTCGAGAAGCGCG 76108 Query 26309 TCGGCGACTATCA 26321 |||| || || || Sbjct 76107 TCGGTGATTACCA 76095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838878614400