Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq33 104 2e-16 seq144 89.7 3e-12 >seq33 Length=207680 Score = 104 bits (114), Expect = 2e-16 Identities = 354/550 (64%), Gaps = 4/550 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || ||||||||| | || || || ||| || || | | | | | ||| | | Sbjct 80195 GCCATCGGTATTGATCTTGGTACCACGTACTCCTGCGTGGGTATCTACAGAGATGACAGA 80254 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 | ||||| |||||||| ||||| || || ||||||||||||| | ||| | || ||| Sbjct 80255 ATCGAAATCATTGCCAACGACCAGGGCAACCGAACAACACCATCTTTCGTTGCCTTCACT 80314 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || || ||||| || |||| || | || | || || || | || Sbjct 80315 GACACCGAGAGACTGATTGGTGACTCTGCAAAGAACCAGGTCGCCATGAACCCAATCAAC 80374 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || || || || | |||| || || || || | ||| | |||||| | Sbjct 80375 ACAGTCTTCGACGCCAAGCGTCTGATAGGCCGCAAGTTCGCCGATGCTGAGGTCCAAGCC 80434 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCAT--ATATAGAAG 474626 || ||| || | ||||| ||||| || | ||||| || ||| || | | Sbjct 80435 GACATGAAGCACTTCCCTTTCAAGGTTATCGACAAGGGTGGCAAGCCAGTCATTTCGGTC 80494 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | || | || || || ||| |||| ||| | || || || ||||| || Sbjct 80495 GAGTTCAAG--GGCGAGGAGAAGACATTCACACCAGAAGAGATCTCGTCGATGGTCTTGA 80552 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||| |||| | | || ||| ||||| ||||| ||||| | || || | | Sbjct 80553 CCAAGATGAGAGAGACTGCGGAATCATACCTTGGTGGCACAGTAAACAACGCTGTCGTCA 80612 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 ||||||||||||| || || || || || | ||||| || || || || || || | Sbjct 80613 CTGTTCCAGCATACTTCAACGACTCGCAGAGACAAGCCACCAAGGACGCCGGTCTGATCG 80672 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||||| || ||| | || || || || || ||||| || || || |||| || |||| Sbjct 80673 CTGGTCTCAACGTTCTCCGAATCATCAACGAGCCAACCGCTGCTGCCATTGCCTACGGTC 80732 Query 474867 TTGATAAGAA 474876 |||| ||||| Sbjct 80733 TTGACAAGAA 80742 >seq144 Length=62325 Score = 89.7 bits (98), Expect = 3e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||||| || || |||||||| ||||| || || || || ||||| || || ||| Sbjct 23892 AGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGA 23833 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 || |||||||||||||| || || |||||| || || || || | | | | | Sbjct 23832 ATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACT 23773 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || || |||||||| || || ||||| Sbjct 23772 TCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTG 23729 Score = 86.0 bits (94), Expect = 4e-11 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || ||||| || || || || || || || || || || || || | ||||| | Sbjct 24171 AGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGA 24112 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || | |||||| |||||||| || | || |||||||| || ||||| || ||| Sbjct 24111 CCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACCCTCC 24052 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 |||||||||||||| ||||| ||||| || || | | | | || ||| || Sbjct 24051 TTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAA-AGT 23993 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || |||||||| || ||||| || Sbjct 23992 AATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTG 23957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268157323625480