Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq52 145 2e-29 >seq52 Length=173047 Score = 145 bits (160), Expect = 2e-29 Identities = 549/855 (64%), Gaps = 11/855 (1%) Strand=Plus/Minus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTC-GTCGC--TGTATTCTACAATCTCACAG 155648 || |||||||| || || ||| ||| ||| | || |||| || ||||||||| | Sbjct 72372 GAAGCCAGATTGCAGACAGCAACCTC---GTCAGGAGCAGTGTACTCGACAATCTCAGTG 72316 Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 |||| ||| || |||||||||||| | ||||||||||| || || ||||| |||||| Sbjct 72315 CACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCA 72256 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAG 155768 |||||||| || ||| | ||| | || ||||| | ||||| |||| || ||| Sbjct 72255 TCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCAC 72196 Query 155769 AGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCGACTCATATTTCATATACAG 155827 || | | || || | | | |||| | || |||||| ||| |||||| | || Sbjct 72195 AGCTTCTGTGCCTTCA-TAGTTTGTCGACCTCGACCTTCCCTCTCGTATTTCTCGAAAAG 72137 Query 155828 CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAG 155887 | | | | || || || || || || || ||||| || || ||||| || || Sbjct 72136 TGCTTCGAACTCGTCGCCATAGCAGTCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAG 72077 Query 155888 CGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATA 155947 | ||| || || || |||| ||| || | ||| ||| | |||||| Sbjct 72076 AGTCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATA 72017 Query 155948 GAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTC 156007 ||| | || | || | |||||| | ||||||||||| || || | | ||| || Sbjct 72016 GAACAAATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTC 71957 Query 156008 CTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CC 156064 | ||| | ||| ||||| ||||| || || || ||| |||||| || Sbjct 71956 AAATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACC 71897 Query 156065 ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATT 156124 ||| ||||| ||||| || || || || | ||||| | ||||| || | | ||| || Sbjct 71896 ACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTT 71837 Query 156125 GGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAG 156184 ||| || || || || ||| ||| | || || | | || | || |||| || || Sbjct 71836 GGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAG 71777 Query 156185 TCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACC 156244 ||||| ||||| | ||| || || ||| || ||| | ||| | | | ||||| Sbjct 71776 ACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACC 71717 Query 156245 TTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGT 156304 || || || || || | ||| | || |||| || | ||| | | ||||||| Sbjct 71716 CTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGT 71657 Query 156305 TCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTA 156364 || |||||||| || || || | ||||| |||| ||| | ||||| | ||| Sbjct 71656 GCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTA 71597 Query 156365 TGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACAT 156424 ||||| | ||| |||| | |||||||| | | |||||| | ||| ||| Sbjct 71596 GGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACACGCATAAGCAT 71537 Query 156425 ATGCTGAGGACGCTC 156439 ||||| || | ||| Sbjct 71536 GTGCTGGGGCCTCTC 71522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807982591870