Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq52 143 3e-28 seq23 138 1e-26 seq57 136 5e-26 seq53 113 6e-19 >seq52 Length=173047 Score = 143 bits (158), Expect = 3e-28 Identities = 211/299 (71%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| ||||| || |||| || |||||| | |||||||| ||||| |||||||| Sbjct 71892 TGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGAT 71833 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||| ||||| || | ||| | ||||| || || | ||||| | | || Sbjct 71832 GTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCA 71773 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 ||||| || || || ||||| | || || ||||| ||||||||||| ||||| Sbjct 71772 ATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCT 71713 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||||| |||||||||| | ||| ||||| || || |||| | || | ||||| Sbjct 71712 ATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCT 71653 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || ||||||| || || |||| || | |||||| || |||||| Sbjct 71652 GCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGT 71594 >seq23 Length=250726 Score = 138 bits (152), Expect = 1e-26 Identities = 130/160 (81%), Gaps = 7/160 (4%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA--GGCCTCGGCG 19104 |||||||| |||||||| || || |||||| || ||| |||| || |||||||||| Sbjct 74867 GACAGCATTGGCGGCACCGTCACCTGCGTGATCCGGAAC-TGCCC-CATCGGCCTCGGCG 74924 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 ||||| |||||||| |||||||| ||||||| ||||||||||||||||| || || | Sbjct 74925 AGCCGGCGTTTGACAAACTCGAGGCCACGCTCGCGCACGCCATGCTGTCGATTCCCGCGA 74984 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTGCG 19202 ||||||| |||||||||||| |||| || |||| |||| Sbjct 74985 CCAAGGGCTTCGAGATTGGC-TCGGGCTTCGGCGGCTGCG 75023 >seq57 Length=157134 Score = 136 bits (150), Expect = 5e-26 Identities = 132/167 (79%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189 |||||| || ||||| ||| | ||||| || | ||||| ||| | ||||| || | Sbjct 74591 GTGGGATCAGAAGTTTATGC-AGGTCGACCAAGAAATGCTCTTCGAGATCATCCTGGCTG 74649 Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||| | || ||||||| || |||||| | || |||||| | || |||||||||| Sbjct 74650 CCAACTACTTAGATATCAAGCAACTTCTCGATGTCGGCTGCAAGACCGTCGCCAACATGA 74709 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||| |||||||||||| | |||||||| |||||| || Sbjct 74710 TCAAGGGCAAGTCACCCGAGGAGATCAGAAAGACCTTCAACATCCAG 74756 >seq53 Length=169705 Score = 113 bits (124), Expect = 6e-19 Identities = 162/227 (71%), Gaps = 10/227 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||| | ||||||| |||| || || |||||||| || |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| | || ||| ||||| || || ||||||||||| |||||| Sbjct 76464 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAG 76523 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 ||| ||| |||| || || || || |||||||| |||||| | ||| Sbjct 76524 GCGACGAGACGCTGAGCGAATGT------GCTCTCCTTGTCTGAGATCCATCGAAGAGCC 76577 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA 869402 || |||||||| ||||| | | || | |||||||| ||| |||| Sbjct 76578 CATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAA 76624 Score = 102 bits (112), Expect = 1e-15 Identities = 167/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || |||||| |||||| ||||| |||||||| | || ||||| |||||| Sbjct 76097 GTAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTCCAT 76156 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCAT---CCGAGC-GACGCGAGCA 868814 | ||| ||||||| | |||||||| ||| | || || || ||| | || Sbjct 76157 GAAGTCGAATGGGTTGGTAGCCTTGTAGTACTTG--GGATTGCCCATGCTGACC--AACA 76212 Query 868815 GGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCG 868874 | ||||||||||| |||||||| ||||| ||||||| ||||||||| | || | Sbjct 76213 GTCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATGGTTCATGCCCAACAGAG 76272 Query 868875 CCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931 | || || || | || | | || || | |||||| |||||||||||| ||||| Sbjct 76273 CGACGGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGATGA 76329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107097347011670