Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq52 149 6e-31 seq144 140 3e-28 >seq52 Length=173047 Score = 149 bits (164), Expect = 6e-31 Identities = 608/934 (65%), Gaps = 37/934 (4%) Strand=Plus/Minus Query 139093 TTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTA 139152 ||||| || || || ||||| || | |||| |||||||| || | ||||| || Sbjct 72363 TTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAG 72304 Query 139153 CACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGC 139212 ||||||| || || | || | || ||| |||| ||| |||||||| ||||||||| Sbjct 72303 GACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGC 72244 Query 139213 ATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACA-AG--TCCCT 139268 || |||| |||| || || ||||| || | || | || | || || || | Sbjct 72243 ATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCAT---ACCACAGCTTCTGT 72187 Query 139269 AGCTTG-TA-TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCG 139326 ||| || |||| || || | | | || | |||||| || ||| | ||| | ||| Sbjct 72186 GCCTTCATAGTTTGTCG-ACCTCGACCT--TCCCTCTCGTATTTCTCGAAAAGTGCTTCG 72130 Query 139327 AA-TCGTTCACCGTAGGCGTCAGAAAGATC--GCGACACTTGTCAGGACACATGAGCGAC 139383 || |||| | || ||| ||| || ||| | ||| | | | || || || | || | | Sbjct 72129 AACTCGT-CGCCATAGCAGTCTGATAGACCAGGCGCCTCAT-TCGGG-CAGAAAAGAGTC 72073 Query 139384 CATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGC 139443 || | |||| || || ||| ||||||||| ||| || ||||||| ||| | | | Sbjct 72072 CAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAAC 72013 Query 139444 AAATCGCGCGCCTTCTTATCTTC-CGAACCCATGTTACGTTTC--ATGTTAAGGAAATCA 139500 ||||| || || ||| | || | | || || | | |||| | ||| | ||| ||| Sbjct 72012 AAATCACGAGC--TCTAACCTCCTCCTTTCCGTGATTC-TTTCGGAGGTTCATGAACTCA 71956 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCA 139557 || || || || ||||| || || ||||||||||| | ||||| | || || ||| Sbjct 71955 AATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCA 71896 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 ||||||||||| | || | | || | || || | | ||| || | |||||| | Sbjct 71895 CCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTG 71836 Query 139618 GCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATT 139673 | ||| ||||| || || | | ||| | | || |||||||| | || ||||| Sbjct 71835 GATGTACCGTTAGTGCCGGCAATGTATGAGCCGGT----AGCTCGGATTTTGTGAACATT 71780 Query 139674 GATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATA 139732 | || || || || || ||| || || | | | ||| || | | || ||||| | Sbjct 71779 CAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTG-AGAGTGTCGTAGA 71721 Query 139733 TACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT 139792 |||| ||| ||| |||| ||| || || ||||| || || | ||| | | || Sbjct 71720 TACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTG 71661 Query 139793 TCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATT 139852 ||||| || |||||||| || || || || ||||| | || ||||| | | Sbjct 71660 GTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGT 71601 Query 139853 CGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 ||| || |||||||| | |||| || |||||| || || |||||||| ||||| | Sbjct 71600 TGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACACGCATAA 71541 Query 139913 GCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTA 139972 |||| || ||| || || || || || ||| || || |||| | Sbjct 71540 GCATGTGCTGGGGCCTCTCCCAGACTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCA 71481 Query 139973 GGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||||| ||||||||||| |||||||| || Sbjct 71480 AGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 71447 >seq144 Length=62325 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || ||||| || ||||| || ||||||||||| ||| || || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || || ||||||||||| ||||| || || ||||| ||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || || || ||||| |||| | ||||| || ||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAAC 23905 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| | ||| |||| || |||| || || || Sbjct 23906 ATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGG 23952 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || || | | Sbjct 23269 GATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTAG 23328 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | ||||| |||||||| ||||| || || || || ||||| || Sbjct 23329 CGACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 23388 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | || || || || |||||||| || ||| | | | || || || || Sbjct 23389 ACAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACTACAA 23448 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || || || || || || ||||||||| Sbjct 23449 CATCCAGAAAGAGTCAACCCTCCACTTGGTG 23479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894731902800