Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq14 105 6e-18 seq144 104 2e-17 >seq14 Length=323116 Score = 105 bits (116), Expect = 6e-18 Identities = 209/307 (68%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 34317 CTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAG 34376 ||| ||||| ||||| | || ||| || | |||||| || ||||||||| ||||| Sbjct 217015 CTCGGTCTCGGGGTTCTTGCAGTCCTTGCAGAGGACAAACCTGTTGATGAAACCGTCAAG 217074 Query 34377 CAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT-GT 34435 ||||| | || | || | ||| | ||||||| ||| |||| || | ||| | Sbjct 217075 GGATTCCTGGAGTTTGTCTGACTGGTGTGCTCCGTTGATGATCCATCGGTCATCTTTCGG 217134 Query 34436 AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCG 34495 | | || ||||| || || || ||| | || |||||||| | ||| || | Sbjct 217135 GTTTGTGTTG-GTTTGAGCACCAAGTTCGAAGCCAAAGTACTTGATAACGTAGGAGGGAG 217193 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 ||||| | || | || ||||| || | ||| ||| ||| |||||||| || |||| Sbjct 217194 GACGTGCGAGAGACTGGGCGACCGAAGGAAGATTGGCGACGACGGTCTTGATACCATTGC 217253 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615 |||| ||||| | |||| ||| ||| ||| |||||||||||||| | ||| || | Sbjct 217254 CCTTGCCTTCAATTTTGGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGCGA 217313 Query 34616 CATTGCG 34622 ||| ||| Sbjct 217314 CATCGCG 217320 >seq144 Length=62325 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| |||| ||||||||||| || ||||| || | | Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||| || ||||| |||||| | || || ||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||| || | || || || || || ||||| | ||||||| | | || |||||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAAC 23905 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || || || ||||||||| |||| | ||| | ||||| || Sbjct 23906 ATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGG 23952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839033931430