Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq53 154 2e-31 seq57 138 2e-26 seq52 120 5e-21 >seq53 Length=169705 Score = 154 bits (170), Expect = 2e-31 Identities = 234/330 (71%), Gaps = 11/330 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||| | ||||||| ||| || || |||||||| || |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 794401 TTGAGCCAAAAGATGGCACAGAAAC-TGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||| ||||||| | |||| ||| ||||| || || ||||||||||| ||||| Sbjct 76464 TTGAGCCAGAAGATGG-AGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAA 76522 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGC 794516 | ||||||| |||| || || || || ||| |||| |||||| | || Sbjct 76523 GGCGACGAGACGCTGAGCGAATGT------GCTCTCCTTGTCTGAGATCCATCGAAGAGC 76576 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || ||||| ||||| | | || | |||||||| ||| || |||| | ||| Sbjct 76577 CCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTT 76636 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || | ||||| ||||| ||||| ||||| | ||| |||| ||||||||||| Sbjct 76637 CTGCTTTTGCTCCTTCACGTATGTGTCAATGAGCAAGCTGTACATCTCGGAGTGGATGTT 76696 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||||||||| ||||| Sbjct 76697 CTCCATCATGATCTGGAAGCCATAGAAGCA 76726 Score = 104 bits (114), Expect = 4e-16 Identities = 168/236 (71%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || |||||| |||||| ||||| |||||||| | || ||||| |||||| Sbjct 76098 TAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTCCATG 76157 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCA---CCCGAGC-GACGCAAGCAG 794023 | ||| ||||||| | | ||||| ||| | | ||| || ||| ||| ||| Sbjct 76158 AAGTCGAATGGGTTGGTAGCCTTGTAGTACTTG--GGATTGCCCATGCTGAC-CAA-CAG 76213 Query 794024 GCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC 794083 |||||||||||||| || || ||||| |||||||| ||||||||| | || || Sbjct 76214 TCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATGGTTCATGCCCAACAGAGC 76273 Query 794084 CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 ||||| || | || | | || || | |||||| |||||||||||||||||| Sbjct 76274 GACGGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGATGA 76329 >seq57 Length=157134 Score = 138 bits (152), Expect = 2e-26 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||||||| | ||||| ||| | ||||| || ||||||||| | || ||||||| Sbjct 74611 AGGTCGACCAAGAAATGCTCTTCGAGATCATCCTGGCTGCCAACTACTTAGATATCAAGC 74670 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 || |||||| | || ||||||||||| |||||| | |||||||||||||| ||||||| Sbjct 74671 AACTTCTCGATGTCGGCTGCAAGACCGTCGCCAACATGATCAAGGGCAAGTCACCCGAGG 74730 Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757 | ||| | |||||||| |||||| || Sbjct 74731 AGATCAGAAAGACCTTCAACATCCAG 74756 >seq52 Length=173047 Score = 120 bits (132), Expect = 5e-21 Identities = 206/299 (69%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || ||||||||||| || |||| || |||||| | |||||||| || || |||||||| Sbjct 71892 TGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGAT 71833 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| ||||| || | ||| | ||| | || || | ||||| | | || Sbjct 71832 GTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCA 71773 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 ||||| || || || ||||| | || || | || || || |||||||| ||||| Sbjct 71772 ATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCT 71713 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||||| |||||||||| | || ||||| || || |||| | | | ||||| Sbjct 71712 ATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCT 71653 Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 || ||||| || ||||||| || || || || |||||||||| | |||||| Sbjct 71652 GCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGT 71594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916192148973890