Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq130 118 7e-22 seq144 116 2e-21 seq125 89.7 3e-13 >seq130 Length=70983 Score = 118 bits (130), Expect = 7e-22 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || | || || || |||||||||||||||| Sbjct 37990 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGA 38049 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || ||||| || Sbjct 38050 TCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT- 38106 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| |||| ||| |||||||| |||||||||||||| Sbjct 38107 -TGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTA 38165 Query 34964 ACAAAG 34969 || ||| Sbjct 38166 ACGAAG 38171 >seq144 Length=62325 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || |||||||| | |||||||||||||||||||| ||||| || Sbjct 24180 CCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 24121 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| |||| |||||| || || ||||| | ||| || || || | || Sbjct 24120 AGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGA 24061 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | ||||| Sbjct 24060 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACT 24001 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||||||||| || || ||||| ||||| |||||||| Sbjct 24000 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 105 bits (116), Expect = 4e-18 Identities = 159/224 (71%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| ||||| ||||| | | |||| |||| Sbjct 23481 AGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCT 23422 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || ||||| || || ||||| ||||| | || | ||||||||||| Sbjct 23421 TCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 23362 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || | | |||||| |||| ||| || Sbjct 23361 TGGATCTTGCTCTTTAC--AT--TATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGAT 23306 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGG 34985 |||||| || ||||||||||| || ||||||||||| | |||| Sbjct 23305 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTTGGTGG 23262 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || || | |||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 23709 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 23650 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||||| |||||||| | || | || |||||||| Sbjct 23649 TCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 23590 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | || |||||| Sbjct 23589 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTC 23530 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 23529 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 96.9 bits (106), Expect = 2e-15 Identities = 156/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 || ||||| |||||||| | || ||||||||| ||||| ||||| || || | | Sbjct 23943 AATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTG 23884 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 | || || |||||||| || |||||||||||||| || ||||| | || | || ||| Sbjct 23883 CCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCC 23824 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAAC 34935 ||||| | ||||| ||||| || | ||||| || || || || || | Sbjct 23823 TTGTCTTGGATTTTCGACTTGAC--AT--TGTCGATTGTGTCGGAGGATTCAACTTCGAG 23768 Query 34936 GGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || || || || ||||| |||||||| ||||| Sbjct 23767 CGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq125 Length=76066 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || || | |||| ||||||||| ||||| |||||||| || | || |||| Sbjct 47326 AGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTTCGGCCATCC 47385 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| ||| |||||||| | || | || |||||||| Sbjct 47386 TCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTC 47444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690775615690