Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq33 147 2e-29 seq40 89.7 4e-12 >seq33 Length=207680 Score = 147 bits (162), Expect = 2e-29 Identities = 303/446 (68%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 || || || ||| ||||||| || | |||||| | || |||| || ||||| || | Sbjct 81054 TCGATACCCTCGTACAAAGAGTCGATTTCAATGGATGTCTGAGCAGAGGAAGAAAGAGTT 80995 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAA 282138 || || ||||| || || || || | |||| ||| | ||| ||| | | || | | Sbjct 80994 CGCTTGGCACGCTCGCAAGCAGTGCGGAGTCGTCGCAGTGCTCGTGC-GTTGGAGCTGAG 80936 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198 || |||| |||||||||||| || | ||| | | ||||| || || || || Sbjct 80935 GTCGCGCTTATGTTTTCTCTTGAATTCGTTAACGAAGTGGTTGACAAGTCGGTTGTCGAA 80876 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 |||||||| ||||| | ||| | || | || | | |||||| || | || || || Sbjct 80875 GTCTTCACCACCCAAGTGAGTGTCACCAGCGGTCGATTTTACTTCAAAGATGCCCTCCTC 80816 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | | || | ||||| || |||||||||| || ||||| || ||||| | Sbjct 80815 GATTGTGAGGAGTGATACATCGAAAGTACCACCACCCAAGTCGAAAATGAGGACATT--T 80758 Query 282319 TTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 || || || || || |||||||| || |||| |||||||| ||||| || || Sbjct 80757 CGCTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTTGGCTCGTTG 80698 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || |||| | ||| || |||||||| || || || || || ||||||||||| || Sbjct 80697 ATGATTCGGAGAACGTTGAGACCAGCGATCAGACCGGCGTCCTTGGTGGCTTGTCTCTGC 80638 Query 282437 GAATCGTTAAAATATGCAGGAACAGT 282462 || ||||| || ||||| |||||||| Sbjct 80637 GAGTCGTTGAAGTATGCTGGAACAGT 80612 >seq40 Length=192906 Score = 89.7 bits (98), Expect = 4e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | ||| || |||| || ||||||||||| || || | || || || ||| | Sbjct 190585 TTGTCCAAACCGTAGGCAATCGCGGCAGCAGTTGGCTCGTTGACAACTCGCAGCACAGTC 190526 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||| ||| | ||||||||||| || || |||| || | |||||| || || || Sbjct 190525 AAACCAGCGATTGTGCCTGCATCTTTCGTCGCCTGTCGCTGGGCATCGTTGAAGTAAGCT 190466 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 || || |||| ||||| | ||| || | || |||| ||| || Sbjct 190465 GGGACGGTAACGACGGCGTGTGTGACCTGCTTGCCAACATAGGC 190422 Score = 89.7 bits (98), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 ||| ||| |||| || || || | ||| ||||||||||| | || |||| |||||| || Sbjct 191501 TTTGTCACCGGCCGTAACCTTTAAAATTCCATTGGCATCGAGCTCGAATGAGACTTCGAT 191442 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 ||| ||||| |||| | | ||||||||| || || | ||| | || ||| | || Sbjct 191441 TTGCGGGACGCCTCGTGGGGAAGGTGGGATACCAGTCAGTTCGAATTTGCCGAGAATGTT 191382 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT 281577 || ||||| || | ||||||||||||||| | ||||| Sbjct 191381 GTTGTCTTTGGTCATGGATCGTTCACCCTCGAAGACCTGGAT 191340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740605361155260