Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq53 149 6e-31 seq52 143 3e-29 seq144 118 1e-21 seq130 95.1 1e-14 seq125 87.8 2e-12 >seq53 Length=169705 Score = 149 bits (164), Expect = 6e-31 Identities = 535/821 (65%), Gaps = 37/821 (5%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||||||| ||||| || ||||| || ||||| ||| || ||||| | Sbjct 76094 CTGGTAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTC 76153 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAA-CTGTACGAGCA 120469 ||| || ||||| |||||| | || || |||| || || | ||||| ||| || | || Sbjct 76154 CATGAAGTCGAATGGGTTGGTAGCCTTGTAGTACTTGGGATTGCCCATGCTG-ACCAACA 76212 Query 120470 GTCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAAC 120528 ||||||| || || ||||| || |||| |||| | | | ||||||||||| || Sbjct 76213 GTCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATG-GTTCATGCCCAACAGA 76271 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || || || | || ||| | || |||| ||| ||| | || ||||| ||| || Sbjct 76272 GCGACGGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGA---TG 76328 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC-GGTAGTACAG------ 120641 | | | || |||| | || | || | ||| ||| | | || Sbjct 76329 ACTTTCTCAATGA-------CATCCTTTGATGGACGGTGGTTGAGGTGGGAGAGAAGGAG 76381 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| || ||||| ||||||| ||||||||| || || || || |||||| || || || Sbjct 76382 GCATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAG 76441 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 || ||||||| ||| | |||||| |||| |||| |||||| ||| || ||||| Sbjct 76442 ACCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAA 76501 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CTGT 120820 | ||||| ||| ||||||||||| | |||| || || || | |||| ||| Sbjct 76502 AATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAATGTGCTCTCCTTGTCTG- 76560 Query 120821 CGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGT 120880 |||||| | ||||| |||||||| || | | || || || |||| |||| Sbjct 76561 AGATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGT 76620 Query 120881 TCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATG----GATGAGCAGATTG 120936 | ||| || ||| || | | | ||| | ||| ||||||| || Sbjct 76621 CGAACAG---GTACTGCTTCTGCTTTTGCTCCTTCA-CGTATGTGTCAATGAGCAAGCTG 76676 Query 120937 TACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTC- 120995 ||||| || | ||| | | ||| |||| | || | || ||| | | || || Sbjct 76677 TACATCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCTTCG 76736 Query 120996 -CAGCTCGGGCACCGCCCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGG 121054 | || || | | || | | | ||||| ||||| || ||||| | ||| | Sbjct 76737 GGAACTTGGACTTCACCAG--AGAAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCAG 76794 Query 121055 CGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTG- 121113 ||| |||||||| || |||||||| ||| || | || || ||||| |||||||| Sbjct 76795 AGGCAGCGAAGAAGGCGAGCACGTGGGAGATGAAATAACGTTCATCGTCGTTGAGCTTGT 76854 Query 121114 TGCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 || || | |||| ||| |||||||||||||||||||| Sbjct 76855 TGTGC-CAGTCGTGGAGGTCTTTGGACAGGTCGACCTCCTC 76894 >seq52 Length=173047 Score = 143 bits (158), Expect = 3e-29 Identities = 618/963 (64%), Gaps = 13/963 (1%) Strand=Plus/Minus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 |||| || || |||||||| || || ||| || || || ||||||| || ||||| Sbjct 72378 GCGACCGAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCA 72319 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||||| || | | ||||| ||| | |||||| || ||| ||| |||||||| Sbjct 72318 GTGCACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAA 72259 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGA 149000 || |||||||| |||||| |||| ||| || || || | ||||| || | | | Sbjct 72258 GCATCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGAT-AGCATA 72200 Query 149001 TG-CAGGTCCTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAGTAT 149058 ||| | ||| || || | | | ||| ||||| ||| ||||||| Sbjct 72199 CCACAGCTTCTGTGCCTTCA-TAGTTTGTCGACCTCGACCTTCCCTCTCGTATTTCTCGA 72141 Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACA 149118 | || |||||| | ||||| ||||| || ||||| || || | |||||| | Sbjct 72140 AAAGTGCTTCGAACTCGTCGCCATAGCAGTCTGATAGACCAGGCGCCTCATTCGGGCAGA 72081 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 || | ||| | || | | ||| |||||||| |||| |||||| | ||| || | Sbjct 72080 AAAGAGTCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAG 72021 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GC 149237 | || | | || || || | || || || || || ||||| | | Sbjct 72020 CATAGAACAAATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGA 71961 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297 || | |||| || || ||||| ||||||| || | |||| ||||| | |||| Sbjct 71960 ACTCA-AATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTG 71902 Query 149298 ---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 || || || ||||| | ||| | |||||| ||| || | || ||| ||| | | Sbjct 71901 TTACCACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGA 71842 Query 149355 CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 || ||| || |||||||| | |||| |||| ||||| | |||||| || Sbjct 71841 CCGTTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACA 71782 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTA 149473 || | || ||||| || | | |||||||| || || ||| ||| || ||| Sbjct 71781 TTCAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTT-GAGAGTGTCGTA 71723 Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533 ||| ||||| || ||| ||||||| | || ||||| || ||||||| | Sbjct 71722 GATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTG 71663 Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAA-ATATTTCTGGCTCATCA 149592 | ||||| || ||||| ||||| ||| |||||||| || ||| ||| ||| | Sbjct 71662 TGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTT-TGGGACATGA 71604 Query 149593 TCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCA 149652 | ||| | ||||| | || ||||| || || || ||||||| | ||| |||| Sbjct 71603 GGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACACGCA 71544 Query 149653 TCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTT 149712 | ||||| ||||| || | |||| ||||| || ||| || | ||| | | Sbjct 71543 TAAGCATGTGCTGGGGCCTCTCCCAGACTTTTCCGTCATATTTCAGGAGGTATGATCTCT 71484 Query 149713 CTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGT 149772 | | |||||| |||||||||||| ||||| ||||| ||| ||| | | ||||| | || Sbjct 71483 CCAAGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCAGAGT 71424 Query 149773 CGA 149775 || Sbjct 71423 TGA 71421 >seq144 Length=62325 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||||||||| || ||||| |||| || ||| ||| | || || || Sbjct 23475 AAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCA-TCTTCAAG 23417 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| |||| || || || |||||||| || ||||| |||||||| ||| Sbjct 23416 CTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGGAT 23357 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | |||||| | | ||| || || | ||||| ||| ||||| Sbjct 23356 CTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGTCTTGCC 23297 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 23296 AGTGAGGGTCTTGACGAAGATCTGCAT 23270 Score = 114 bits (126), Expect = 1e-20 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | ||||||||| ||||| || ||||| ||| | || || || || || ||| Sbjct 23701 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCTTCAAGC 23644 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || | ||||||||| ||||| || ||||||||||| ||| Sbjct 23643 TGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATC 23584 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||||| | ||| || |||| |||| ||| ||||| Sbjct 23583 TTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTCTTGCCA 23524 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 23523 GTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||||||||| |||||||| ||| | || || ||||| |||||||| || ||||||||||| Sbjct 23881 GTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTT 23822 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||||| | || | ||||||| || || || |||| |||| Sbjct 23821 GTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGAT 23762 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||| || ||||| || || || || ||||| Sbjct 23761 GGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq130 Length=70983 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| ||||||||||| || ||| | || | |||||||||||||| ||||| || ||||| Sbjct 38024 GTCTTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTT 38083 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | || ||| || || | ||||| Sbjct 38084 GTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGAT 38143 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651 ||| ||||| || || || || ||||| Sbjct 38144 GGTCTTGCCCGTGAGGGTCTTAACGAA 38170 >seq125 Length=76066 Score = 87.8 bits (96), Expect = 2e-12 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || | || | | | |||||||||| Sbjct 47334 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTTCGGCCA-TCCTCGAGCT 47392 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||||||| ||| | || | |||||||||||||| ||||||||||||||||| Sbjct 47393 GCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTC 47444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417718192400