Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq52 161 2e-34 >seq52 Length=173047 Score = 161 bits (178), Expect = 2e-34 Identities = 360/538 (67%), Gaps = 7/538 (1%) Strand=Plus/Plus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTT 110528 ||||| | || || || || |||||||| || || |||| || | |||||||| Sbjct 71627 CATGCCTCGCCCACTCTGTTCAACGCAGGCACACCACAAGCACAAATGTCATCTTGCTTC 71686 Query 110529 CTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCT 110588 || | | || || || || || || || ||||| || || |||| || |||| Sbjct 71687 CTCATCGACATGAAGGAAGACTCAATAGAGGGTATCTACGACACTCTCAAGACTTGTGCT 71746 Query 110589 CTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGA 110648 | || || ||||| |||| || |||||| | | ||||| | || || | | || Sbjct 71747 ATGATCTCAAAAAATGCTGGTGGCATTGGTCTGAATGTTCACAAAATCCGAGCTACCGGC 71806 Query 110649 GCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTC 110708 || | || || | || ||| | || | || || || || ||| | || ||||| Sbjct 71807 TCATACATTGCCGGCACTAACGGTACATCCAACGGTCTCGTACCCATGCTTAGGGTCTTT 71866 Query 110709 AACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATC 110765 || |||| || ||||| ||||||||||||| |||| |||| | || || ||| Sbjct 71867 GACAACACCGCCCGCTATGTCGATCAAGGTGGTAACAAGAGACCTGGCGCCTTCGCCATC 71926 Query 110766 TATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGA 110825 ||||| || ||||||||| | ||| ||||||| ||| | | || || || ||||| ||| Sbjct 71927 TATCTTGAGCCTTGGCATGCCGATGTATTTGAGTTCATGAACCTCCGAAAGAATCACGGA 71986 Query 110826 TTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATG 110885 || || ||||| |||||||| || ||||| ||||||| | ||||| |||||| Sbjct 71987 AAGGAGGAGGTTAGAGCTCGTGATTTGTTCTATGCTCTGTGGATCCCCGATTTGTTCATG 72046 Query 110886 AAACGTGTTCAAGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTC 110943 || || || | | || || | ||| ||||| | || || || | ||||||| Sbjct 72047 AAGCGAGTGGAGAAGAAC--CAAGACTGGACTCTTTTCTGCCCGAATGAGGCGCCTGGTC 72104 Query 110944 TATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 |||| || ||||| | ||||| |||| |||| ||| ||||| || | ||||| Sbjct 72105 TATCAGACTGCTATGGCGACGAGTTCGAAGCACTTTTCGAGAAATACGAGAGGGAAGG 72162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805044920110