Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq53 96.9 3e-15 seq144 93.3 4e-14 >seq53 Length=169705 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105 ||||| || ||||||| |||| || |||| | || || |||||||| || ||||| Sbjct 76321 GAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGGC 76262 Query 47106 ATGAACGCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCA 47164 |||||| || | || ||| | ||||| ||||| || || || || |||||||| || Sbjct 76261 ATGAAC-CATACCCTCATGAAGCAGTATATCGAGTTCGTCGCCGACCGACTGTTGGT-CA 76204 Query 47165 GCTCGGACAA-CCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTT 47223 || || ||| || || || | || ||| || || || || || ||| | ||||| | Sbjct 76203 GCATGGGCAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCT 76144 Query 47224 CGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | || | ||||| || || || |||||||| || ||||| || || Sbjct 76143 CCCTGGCCGGCAAGACTAACTTCTTCGAGAAGCGCGTCGGTGATTA 76098 >seq144 Length=62325 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | |||||||||| || |||||||||||||||| ||| || |||||| Sbjct 23478 ACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCA 23419 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | | || ||||| ||||| || || || ||||| || || || Sbjct 23418 AGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 23359 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || ||| | | ||| || || | || | || || Sbjct 23358 ATCTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGTCTTG 23299 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || | ||| |||||||| Sbjct 23298 CCAGTGAGGGTCTTGACGAAGATCTGCAT 23270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608161603600