Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq52 143 4e-29 >seq52 Length=173047 Score = 143 bits (158), Expect = 4e-29 Identities = 424/645 (66%), Gaps = 8/645 (1%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 ||||| ||||| || | |||||| ||||| ||||| ||| || | ||| | | |||| Sbjct 72054 ACTCGCTTCATGAACAAATCGGGGATCCACAGAGC-ATAGAACAAATCACGAGCTCTAAC 71996 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 || || ||||| ||| ||| || | | ||||| | | ||| | |||||| || Sbjct 71995 CTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGG 71936 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 || ||||| || || | | | || |||| || || || || ||||| | || | ||| Sbjct 71935 CTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCACCTTGATCGACATAGCGGGC 71876 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||||| | | |||| || ||||| || | | ||| || ||| |||| || || || | Sbjct 71875 GGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGC 71816 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || || | || || || || || | ||||| || || || || |||| Sbjct 71815 AATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTT 71756 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 ||||| | ||||||| || | ||||| || ||||||||||| || || |||| Sbjct 71755 TGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCAT 71696 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || | || || || |||||||| ||| || || || || || | || || Sbjct 71695 GTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGG 71636 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT 70073 || || || || ||| |||| || | || ||||| || || || || ||| || Sbjct 71635 CGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAAT 71576 Query 70074 ATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC- 70131 || | | | ||||| |||| | ||||||||| | ||| ||||| || | ||| || Sbjct 71575 GTCGTCTCCG-TGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCC--TCTCCCA 71519 Query 70132 GTTTTATTATTTAT-TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTT 70190 | || | | || ||||| ||||||||| | |||| || || || ||||| || | Sbjct 71518 GACTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTACTG 71459 Query 70191 GTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||| ||||| | ||||| | || |||| || || | ||| Sbjct 71458 GTAGTTGAAGTCACGGTCGTAGACGATGGCAGAGTTGAGCTCATC 71414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904420956400