Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq52 235 7e-57 seq53 109 7e-19 >seq52 Length=173047 Score = 235 bits (260), Expect = 7e-57 Identities = 1136/1781 (64%), Gaps = 53/1781 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||||||| || | ||| | | |||||| |||||||| || |||||||| | Sbjct 73283 TGAACTGAATTGGTGCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGTCTTGAGAC 73224 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGA-CTTTCCA-T 110448 | ||||| | | ||||| || | | |||| ||| ||||| ||||| | | Sbjct 73223 CCATCTTCCAGCCAGCGAAGTGCATGGACGTAATCTTGCCCATGGTTGGCTCTTTCAAAT 73164 Query 110449 GAAGAGGTTCATACTTTGACTTTGGTCAATGAA-GCGCCCCCGTTGTGCCGCCATATCAA 110507 | || ||| | | || ||| |||||||| || || | || | || ||||| | | Sbjct 73163 G--GATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCG-GCGGCCATTTGGA 73107 Query 110508 TGACATCCTTCATCTTAA--TTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGG 110565 ||| || ||| | | | | ||||| || || ||||| ||| |||||| |||| Sbjct 73106 TGA--TCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTAATATCAGCTGG 73049 Query 110566 GATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTT 110625 ||| | | || || |||||||| || || | | || | |||||| | | Sbjct 73048 GATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTGTTCTTCATGTTGTC 72989 Query 110626 GGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTC 110685 ||||| ||||||| | ||||| |||| || |||||| | || || Sbjct 72988 TGACCATAGACCAAGATCAACAAGGTCCTTGAGAAGCCAAGGGTTGACGACTTGGAATTC 72929 Query 110686 ACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATT 110745 || || | | || | ||||||||| | |||||||| || ||||| || || || Sbjct 72928 GCCAGCCAAGACTCGACGAGAGTAGATGTTGGACGTGTATGGCTCGAAGCACTCGTTGTT 72869 Query 110746 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 110805 ||||| || |||| ||| || || |||||||| || || | | || ||| |||| Sbjct 72868 GCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAACGAGGAGCGAGTTGCGAAC 72809 Query 110806 ACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCA 110863 ||| | || ||| |||| | |||||||| | || | | ||| ||| Sbjct 72808 ACCATGCTGAGCGATCTTCGCCTTCAAGCTGTCCCAGTCCCAAA-GATCGGTAGGTGTCA 72750 Query 110864 CCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCA 110923 | | |||| | || |||||||| |||||||| || || || ||| | || ||| Sbjct 72749 C-TCCCCAGAGATCGTACTGAAGCTGGCCTTGGGAGATCGGCGAGCCTTCATATGTCTCA 72691 Query 110924 TAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTT 110983 || | ||| | ||| || | || || || || | ||||| || ||||| Sbjct 72690 TAAGGACCCAGCTGTTCGGCGAGCTCGCATGATGCGGTCAATGCAGCGTGGTAGATGGTC 72631 Query 110984 TCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGC 111038 || ||||| || |||| || |||||| ||| || || |||| || || | | Sbjct 72630 TCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGGGATTCGAATGGCAGTCGAAGTGCC 72571 Query 111039 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098 | ||| |||| ||||||||||| || || | ||| ||||| | |||| | | Sbjct 72570 AAGAAAG-----CATCAGCGAGACCTTGGACGCCGAGACCGATAGGCCGATGTCTAAAGT 72516 Query 111099 TAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 111157 | ||| || ||| || || || | || | ||||| | ||| | || Sbjct 72515 TGCTCTTCTTGGCT-TCTGGCACTGGGTAGTAGTTGATCTCAATAATCTTGTTCAAGTTC 72457 Query 111158 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGC-GAGTCTC--- 111213 ||||| | | || || |||| || || | | || || | || ||| Sbjct 72456 TTGGTCATGACCTGGATGGTTTCGTGGAGACGACCGAAGTC----GTACTGACCCTCGTT 72401 Query 111214 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 111273 || | ||| | || || |||| || |||| |||||| ||||| ||| || Sbjct 72400 TTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACAGCAACCTCGTCAGG 72341 Query 111274 ATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 111333 | | |||||||| | ||| || || || ||||| || ||| || || || | ||||| Sbjct 72340 AGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTT 72281 Query 111334 TTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 111393 ||||| ||| ||||||| ||||||||||| |||||| | || | |||||||| || Sbjct 72280 CTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGT 72221 Query 111394 CTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGT 111451 |||| || | ||||| | ||| | | || | | | | || || || | || Sbjct 72220 TTGTGCTTCCAAGATAGCATACCACAGCTTCTGTGCCTTCATAGTTTGTCG--ACCTCGA 72163 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAG 111510 || ||| |||||| || | | || ||||| ||||| || ||| || ||| || || Sbjct 72162 CCTTCCCTCTCGTATTTCTCGAAAAGTGCTTCGAACTCGTC-GCCATAGCAGTCTGATAG 72104 Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTC 111568 ||| || |||| | || |||||||||| ||| | | ||| ||| || |||||| Sbjct 72103 ACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCA--GTCTTGGTTCTTCTCCACTCGCTTC 72046 Query 111569 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCA 111628 ||||| | || || |||||||| | | || | ||| | | | | |||| || | Sbjct 72045 ATGAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAACCTCCTCCTTT 71986 Query 111629 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 111688 || || || ||| | | | |||||| | | ||| || ||||| |||||||||||| Sbjct 71985 CCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGATAG 71926 Query 111689 ACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCG 111742 | |||| || || ||| | ||| |||||| |||||||| || ||| | Sbjct 71925 ATGGCGAAGGCGCCAGGTCTCTTGTTA---CCACCTTGATCGACATAGCGGGCGGTGTTG 71869 Query 111743 TTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGA 111802 | ||| || | |||||| || | | ||| | ||| ||| || || || ||| Sbjct 71868 TCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTAT 71809 Query 111803 GATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATT 111862 || | |||| | | || | | || ||||| || ||||| |||||||| Sbjct 71808 GAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTTTGAGATC 71749 Query 111863 TGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 111922 ||||| | | ||||| | |||||||| | |||||||| ||||| || |||| Sbjct 71748 ATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCATGTCGATG 71689 Query 111923 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 111982 ||||||||| ||||| || | | |||||| || || ||||| || || || | || Sbjct 71688 AGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCA 71629 Query 111983 TGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042 || | ||||| ||||||||| || ||| ||||| | | | |||||||| || Sbjct 71628 TGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCT 71569 Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| ||||| | | ||| ||||| | ||||| ||| || Sbjct 71568 CCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGG 71528 >seq53 Length=169705 Score = 109 bits (120), Expect = 7e-19 Identities = 187/268 (70%), Gaps = 10/268 (4%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| |||||||| || ||||| || |||||| ||||||||||||||||| |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | ||| | || | | || || ||||||||||| |||||||| || ||||| Sbjct 76464 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAG 76523 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTTC 122856 || | || || | ||||| | || ||| | | |||| | ||||||| Sbjct 76524 GCGACGAGACGCTGAGCGAATGTGCTCTCCTTGTCTGAGATCCATCGAAGAGCCCATTCG 76583 Query 122857 GCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATA---ACTGCTTCT--TTT 122911 ||||||||| |||||||| | || | ||| || || || | ||||||||| ||| Sbjct 76584 GCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTTCTGCTTT 76643 Query 122912 CAGATCCATCCTTAATGTATTTGTCAAT 122939 | | ||||| | |||| ||||||| Sbjct 76644 ----TGC-TCCTTCACGTATGTGTCAAT 76666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027996296000