Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq52 347 1e-90 seq53 122 1e-22 >seq52 Length=173047 Score = 347 bits (384), Expect = 1e-90 Identities = 1213/1855 (65%), Gaps = 69/1855 (4%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| ||| | |||| | | ||||||||||||||| ||||||||||| | Sbjct 73283 TGAACTGAATTGGTGCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGTCTTGAGAC 73224 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGA-CTTTCCA-T 117922 || ||||||| || | ||||| || | | |||| | |||||| ||||| | | Sbjct 73223 CCATCTTCCAGCCAGCGAAGTGCATGGACGTAATCTTGCCCATGGTTGGCTCTTTCAAAT 73164 Query 117923 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAAT 117982 | || ||| | | || |||||||| ||||| || || || || ||||| | || Sbjct 73163 G--GATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCGGCGGCCATTTGGAT 73106 Query 117983 CACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 | || ||| | ||| | ||||| || ||| |||||||| |||||||||| ||||| Sbjct 73105 GA--TCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTAATATCAGCTGGG 73048 Query 118041 ATATCCACGATATTTTGGATGGA---TCCACCCGCCTTGACCATGAGATCCTTCATATCC 118097 || | | || ||||||||||| |||| | || ||| || | |||||| | Sbjct 73047 ATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTG---TTCTTCATGTTG 72991 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACA 118154 | |||||| ||||||| | || |||| |||| || | ||||| || Sbjct 72990 TCTGACCATAGACCAAGATCAACAAGGTCCTT---GAGAAGCCAAGGGTTGACGACTTGG 72934 Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTC 118213 || || || || | | || | ||| ||||| |||| |||||||||||| |||||||| Sbjct 72933 AATTCGCCAGCCAAGACTCGACG-AGAGTAGATGTTGGACGTGTATGGCTCGAAGCACTC 72875 Query 118214 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 ||||| ||||| || || | || || || || ||||| || || | ||| || ||| Sbjct 72874 GTTGTTGCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAACGAGGAGCGAGTT 72815 Query 118274 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC-GTCCCAGTCGTAGTTGAGCTTT- 118331 || | ||| | | || |||| | ||| ||||||||| | || | | Sbjct 72814 GCGAACACCATGCTGAGCGATCTTCGCCTTCA-AGCTGTCCCAGTCCCAAA-GATCGGTA 72757 Query 118332 -GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 118390 || || | | ||| | ||| |||| || |||||||| ||||| || ||| | Sbjct 72756 GGTGTCACTCC-CCAGAGATCGTACTGAAGCTGGCCTTGGGAGATCGGCGAGCCTTCATA 72698 Query 118391 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG--AGCTCGCCTC--GAGG-----GC 118441 ||||||||| || ||| | || ||||| ||||||| | | || || Sbjct 72697 TGTCTCATAAGGACCC---AGCTG------TTCGGCGAGCTCGCATGATGCGGTCAATGC 72647 Query 118442 TGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAA 118501 ||||| || || || || || || || |||| ||||||||| ||| || || Sbjct 72646 AGCGTGGTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGGGATTCGAA 72587 Query 118502 CGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 118559 | ||||| | | || || |||| |||||||||||||| ||||| || || || Sbjct 72586 TGGCAGTCGAAGTGCCAAGAAAG--CATCAGCGAGACCTTGGACGCCGAGACCGATAGGC 72529 Query 118560 CGATGTCTCATATTAGACTTCCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAAC 118618 |||||||| | || |||| || ||| ||| || || | || | || |||| Sbjct 72528 CGATGTCTAAAGTTGCTCTTCTTGGCT-TCTGGCACTGGGTAGTAGTTGATCTCAATAAT 72470 Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678 | | || | || ||||| | |||| || |||| || || || | || | || Sbjct 72469 CTTGTTCAAGTTCTTGGTCATGACCTGGATGGTTTCGTGGAGACGACCGAAGTCGTA-CT 72411 Query 118679 GCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGG 118737 | || | || | ||| | || || |||| || |||||||| || |||| Sbjct 72410 GACCCTCGTTTTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACAGCAA 72351 Query 118738 TCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGC 118797 ||| || | |||||||||| | ||| || ||||||||||| || ||| ||||||| Sbjct 72350 CCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATGGTGC 72291 Query 118798 CCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCC 118857 | | |||||| || || |||||| |||| || |||||||||||||||||| | || | | Sbjct 72290 CAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGGTTGC 72231 Query 118858 CCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCG 118916 ||||||| ||||| | | | ||||| | ||| | | || | || || ||| | Sbjct 72230 CCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGCTTCTGTGCCTT-CATAGTTT-G 72173 Query 118917 TTGGC-TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGC 118975 | | | ||| || || |||||| || | | || ||||| ||||| || || | Sbjct 72172 TCGACCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTGCTTCGAACTCGTCGCCATAGCA 72113 Query 118976 CTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAAC 119035 ||||| || || || |||| || |||||||| |||| ||| | || ||| || Sbjct 72112 GTCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCAGTCTTGGTTCTTCTCCAC 72053 Query 119036 CCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTC 119095 ||||||||||| | || |||||||| || || |||| | ||| ||| | | | || Sbjct 72052 TCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAACCTC 71993 Query 119096 TTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTC 119155 || | || ||||| || | | || || || | | ||| || ||||| || || Sbjct 71992 CTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGGCTC 71933 Query 119156 CAGGTACACCGCGATTGACCC----CTTACGACGACCAGCCTGGTTTACATACCTCGCAG 119211 || || | |||| | || || | |||| | || | ||||| | || | Sbjct 71932 AAGATAGATGGCGAAGGCGCCAGGTCTCTTGTT-ACCACCTTGATCGACATAGCGGGCGG 71874 Query 119212 TGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA 119271 || || ||| || | |||||| || | || ||| | |||| || || || || || Sbjct 71873 TGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGCAA 71814 Query 119272 T--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTT 119329 | | ||| | | |||| || | ||| | | || |||||| || || || || Sbjct 71813 TGTATGAGCCGG--TAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTT 71756 Query 119330 TGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATT 119389 |||||| || || | ||||| || ||||||| || || || ||||| |||| | Sbjct 71755 TGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCAT 71696 Query 119390 TGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTG 119448 ||||||||||||| |||||||| || || ||||| || |||||||| ||||| | Sbjct 71695 GTCGATGAGGAAGCAAGATGACATTTG-TGCTTGTGGTGTGCCTGCGTTGAACAGAGTGG 71637 Query 119449 GTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAA 119508 | | || || | ||||| ||||||||| || ||||||||| | | | || Sbjct 71636 GCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAA 71577 Query 119509 TGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCA 119568 |||| || |||||||| || | ||||| ||||||| ||||| ||||| | ||| | Sbjct 71576 TGTCGTCTCCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCCTCTCCCAGA 71517 Query 119569 GGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | || || || ||||||| ||||||||||||||| ||||| || Sbjct 71516 CTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTA 71462 >seq53 Length=169705 Score = 122 bits (134), Expect = 1e-22 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| |||||||||||||| || |||||| ||||||||||||||||| |||||| Sbjct 76404 CCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTC 76463 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | ||| ||||| |||||||| || ||||| || || || Sbjct 76464 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAG 76523 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212 || | |||||||| ||| || | || | |||| | | | ||| | ||||| | Sbjct 76524 GCGACGAGACGCTGAGCGAATGTGC-TCTCCTTGTCTGAGATCCATCGAAGAGCCCATTC 76582 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 130266 ||||| ||| |||||| |||| || | ||| || || || || | || ||| Sbjct 76583 GGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCGAACAGGTACTGCTT 76636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431257475600