Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq52 239 5e-58 seq53 131 2e-25 >seq52 Length=173047 Score = 239 bits (264), Expect = 5e-58 Identities = 1147/1786 (64%), Gaps = 63/1786 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| | ||||| || | | || ||||| || || |||||||| | | Sbjct 71528 CCCCAGCACATGCTTATGCGTGTCTCTGTAGGCATTCACGGAGACGACATTGAAAAGGCC 71587 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || ||||||||| ||||| | || || | || || || ||| Sbjct 71588 ATCGAGACCTACAACCTCATGTCCCAAAAGATGTTTACACATGCCTCGCCCACTCTGTTC 71647 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || |||||| | | |||||||| ||||||||| |||| || ||||| ||| Sbjct 71648 AACGCAGGCACACCACAAGCACAAATGTCATCTTGCTTCCTCATCGACATGAAGGAAGAC 71707 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 ||||| | |||||||| | ||||| | | ||||| |||||||| ||||| Sbjct 71708 TCAATAGAGGGTATCTACGACACTCTCAAGACTTGTGCTATGATCTCAAAAAATGCTGGT 71767 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || ||||| || | | || | | |||| | || ||| || || || Sbjct 71768 GGCATTGGTCTGAATGTTCACAAAATCCGAGCTACCGGCTCATACATTGCCGGCACTAAC 71827 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 ||| ||| | ||| | | || |||||| | || ||| || ||| || |||||||| Sbjct 71828 GGTACATCCAACGGTCTCGTACCCATGCTTAGGGTCTTTGACAACACCGCCCGCTATGTC 71887 Query 104582 AATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCAC 104635 |||||| ||| | ||| || || |||| ||||||||||||| ||||| Sbjct 71888 GATCAAGGTGG---TAACAAGAGACCTGGCGCCTTCGCCATCTATCTTGAGCCTTGGCAT 71944 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || ||| | | |||||| | | | || || || || | ||||||| | Sbjct 71945 GCCGATGTATTTGAGTTCATGAACCTCCGAAAGAATCACGGAAAGGAGGAGGTTAGAGCT 72004 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || ||| | |||| ||||| ||||| || ||| | ||||||||| |||| ||| ||| Sbjct 72005 CGTGATTTGTTCTATGCTCTGTGGATCCCCGATTTGTTCATGAAGCGAGTGGAGAAGAAC 72064 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGA 104814 | ||| |||| || || || | |||| |||||||| || || ||| ||| || Sbjct 72065 CAAGACTGGACTCTTTTCTGCCCGAATGAGGCGCCTGGTCTATCAGACTGCTATGGC-GA 72123 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGACGGTG 104872 ||||| ||||| |||| | || |||||| |||||||| | |||| || || Sbjct 72124 CGAGTTCGAAGCACTTTTCGAGAAATACGAGAGGGAAGGTCGAGGTCGACAA--ACTATG 72181 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 || | || | ||||| | ||||| | | | ||||| ||||| || | || | Sbjct 72182 AAGGCA-CAGAAGCTGTGGTATGCTATCTTGGAAGCACAAACAGAGACGGGCAACCCGTT 72240 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||||||||| || || || ||| |||| || || ||||| | || ||||| Sbjct 72241 CATGCTTTACAAGGATGCTTGCAACAGAAAGTCCAACCAGAAGAACCTTGGCACCATCAA 72300 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 | || || | || || || || | || | || | || ||| ||||| || Sbjct 72301 GTCCTCGAACTTGTGCACTGAGATTGTCGAGTACACTGCTCCTGACGAGGTTGCTGTCTG 72360 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 105110 || || || || ||||||| || | || || ||| | | | || | || | Sbjct 72361 CAATCTGGCTTCGGTCGCTCTGCCGTCCTTCGTCGA-CCAAAACGAGGGTCAGTACGACT 72419 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTC---ACCAAAAACCTAAACAGAGTTATTG 105167 | ||||||||| || | ||| ||||| ||| | |||| |||||| Sbjct 72420 TCGGTCGTCTCCACGAA---ACCATCCAGGTCATGACCAAGAACTTGAACAAGATTATTG 72476 Query 105168 ATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 | | || | ||||| || ||| | | | | | || | ||||| || || || Sbjct 72477 AGATCAACTACTACCCAGTGCCAGAAGCCAAGAAGAGC-AACTTTAGACATCGGCCTATC 72535 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACGCATTTGA 105282 |||||||| || || |||||||| |||| | ||||| | ||| | |||| || Sbjct 72536 GGTCTCGGCGTCCAAGGTCTCGCTGATG----CTTTCTTGGCACTTCGACTGCCATTCGA 72591 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| || || ||| | | || | || || |||||||| || ||||| || | Sbjct 72592 ATCCCCTGAGGCCAAGCAGCTGAACATTCAGATCTTCGAGACCATCTACCACGCTGC-AT 72650 Query 105343 TGA-GGCGAGTTCAGAGTTGGCAGA--GGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||| || | ||| | || || | || ||||| ||||| || | ||| || || Sbjct 72651 TGACCGCATCATGCGAGCTCGCCGAACAGCTG--GGTCCTTATGAGACATATGAAGGCTC 72708 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACT 105458 || || ||||| |||||| | ||| | |||| | |||| ||| | | || | Sbjct 72709 GCCGATCTCCCAAGGCCAGCTTCAGTACGATCTCTGGGGA-GTGACACCTACCGATCTTT 72767 Query 105459 ACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 |||||||| |||| | |||| ||| || | ||| |||| ||| |||||| Sbjct 72768 GGGACTGGGACAGCT-TGAAGGCGAAGATCGCTCAGCATGGTGTTCGCAACTCGCTCCTC 72826 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | ||||| |||||||| || || ||| |||| || ||||| || || || ||||| || Sbjct 72827 GTTGCTCCTATGCCAACTGCATCTACCTCACAGATTTTGGGCAACAACGAGTGCTTCGAG 72886 Query 105578 CCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 || |||||| | |||||||| ||| | || | | || || || || | ||||| Sbjct 72887 CCATACACGTCCAACATCTACTCT-CGTCGAGTCTTGGCTGGCGAATTCCAAGTCGTCAA 72945 Query 105637 C---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 105693 | || |||| | ||||| || ||||||| ||||| | | |||||| | Sbjct 72946 CCCTTGGCTTCTC---AAGGACCTTGTTGATCTTGGTCTATGGTCAGACAACATGAAGAA 73002 Query 105694 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAA 105753 || | | || || ||||| ||||| | | | || ||| ||| ||||| Sbjct 73003 CAGAATCATCGCCGATGGAGGCTCCATCCAAAACGTCCCGAACATCCCAGCTGATATTAA 73062 Query 105754 GAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCA 105811 | | ||| || || ||||| | ||| | ||| || |||| | |||||||| Sbjct 73063 GGCCCTCTACAAGACCGTCTGGGAGATCTCACAACGAACGA--TCATCCAAATGGCCGCC 73120 Query 105812 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCA-TGGAAAG-TCCAA 105869 || |||||| |||||||||||| || | | || || || | ||||| |||| Sbjct 73121 GACCGTGGTGCTTTCATTGATCAATCGCAGTCTCTCAACATC--CATTTGAAAGAGCCAA 73178 Query 105870 CGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGA 105929 | ||| |||| | | || |||||| | | ||||||| ||||||||| ||||| | Sbjct 73179 CCATGGGCAAGATTACGTCCATGCACTTCGCTGGCTGGAAGATGGGTCTCAAGACGGGTA 73238 Query 105930 TGTATTACCTCCGATCTAAGG-CAAAGGCGCGCCCAATTCAGTTCA 105974 |||| ||||||||| | | || | | ||| ||||||||||||| Sbjct 73239 TGTACTACCTCCGAACGATGGCCGCATCCGC-ACCAATTCAGTTCA 73283 >seq53 Length=169705 Score = 131 bits (144), Expect = 2e-25 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 94703 AGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATT 94762 ||||| || | || || || || ||| | ||| | || ||||| ||||| || || | Sbjct 76638 AGAAGCAGTACCTGTTCGACGCTATCGACACAATCCCATGTATCAGGAAGAAGGCCGAAT 76579 Query 94763 GGGCTATGAAGTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTT 94821 ||||| | ||| | | | |||| | | | | || ||| |||| ||| |||| ||| Sbjct 76578 GGGCTCTTCGATGGATCTCAGACAAGGA-GAGCACATTCGCTCAGCGTCTCGTCGCCTTT 76520 Query 94822 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAG 94881 || || |||||||| |||||||| || || || | | || | |||||||||||| Sbjct 76519 GCTGCCGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAG 76460 Query 94882 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||||||||||||||||| |||||||||||| || ||||| || |||||||| Sbjct 76459 CGAGGTCTCATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACGAGGG 76404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257081712400