Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq52 149 7e-31 seq17 91.5 2e-13 >seq52 Length=173047 Score = 149 bits (164), Expect = 7e-31 Identities = 340/507 (67%), Gaps = 6/507 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| || | ||| ||||||| ||||| || ||| |||| || ||||||||| Sbjct 71591 GAGACCTACAACCTCATGTCCCAAAAGATGTTTACACATGCCTCGCCCACTCTGTTCAAC 71650 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || || || | || ||||| |||||||| | | |||||||| ||||| Sbjct 71651 GCAGGCACACCACAAGCACAAATGTCATCTTGCTTCCTCATCGACATGAAGGAAGACTCA 71710 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || |||||||| || |||||| ||||| ||||| || | ||||| Sbjct 71711 ATAGAGGGTATCTACGACACTCTCAAGACTTGTGCTATGATCTCAAAAAATGCTGGTGGC 71770 Query 53423 ATCGGTATCCACTGCTCG-AACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | | || || || |||| || | |||| || || || || ||||| Sbjct 71771 ATTGGTCTGAA-TGTTCACAAAATCCGAGCTACCGGCTCATACATTGCCGGCACTAACGG 71829 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 || | || |||| || ||||| | ||||| ||||||| ||||| || ||| | Sbjct 71830 TACATCCAACGGTCTCGTACCCATGCTTAGGGTCTTTGACAACACCGCCCGCTATGTCGA 71889 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || |||||| ||| | || | ||||||||||| || ||||| ||||| ||||| Sbjct 71890 TCAAGGTGGTAACAAGAGACCTGGCGCCTTCGCCATCTATCTTGAGCCTTGGCATGCCGA 71949 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGT 53659 | | ||||| | | || || |||||| || | || ||| | | ||| ||| Sbjct 71950 TGTATTTGAGTTCATGAACCTCCGAAAGAATCACGGAAAGGAGGAGGTTAGAGCT--CGT 72007 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 || |||| ||||||||||| || || | |||||| | ||||||||| || | Sbjct 72008 GATTTGTTCTATGCTCTGTGGATCCCCGATTTGTTCATGAAGCGAGTGGAGAAGAACCAA 72067 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAG 53746 || ||| || | |||||||| ||| Sbjct 72068 GACTGGACTCTTTTCTGCCCGAATGAG 72094 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||||| || || |||||||| || || || | ||||| |||||||| Sbjct 72812 CGCAACTCGCTCCTCGTTGCTCCTATGCCAACTGCATCTACCTCACAGATTTTGGGCAAC 72871 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 |||||| |||||||| |||||| ||||||||||| Sbjct 72872 AACGAGTGCTTCGAGCCATACACGTCCAACATCTAC 72907 >seq17 Length=296012 Score = 91.5 bits (100), Expect = 2e-13 Identities = 191/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || || |||||||| ||||| || ||||| ||||||||||||||| ||| ||||||| Sbjct 108381 AGACCTTTGATATGAGAACCATCGTGATCCTGATCGGTCATGATCATGAGGTGGCCGTAA 108322 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 |||||| | | | | | || | || ||||| || || |||| || || | | Sbjct 108321 CGTAAACCCTTTGTGTCGGTGTAGTCTTTCTTGTGTTGAAGTCCTAGGAAATTCTTGATG 108262 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGC 118192 || || ||| | |||| || | ||| | || | ||||| ||||| ||| | | Sbjct 108261 TTTTGAATTTCTTTGTTTTTCGAGATCTGATCAATTGATGCGTCTCGAACATTGAGGAGT 108202 Query 118193 TTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATA 118252 ||||| || || ||||| || || ||| |||| || || || | ||| || || Sbjct 108201 TTACCTCGAAGAGGAAAAACACCGAACAGGTCAGCACCGACGACAGCCCGGCCCGCCATT 108142 Query 118253 GCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCAC 118297 || | | || || || ||||| ||||| | || || |||||| Sbjct 108141 GCCATACCTTTGGCTGATTCACCTTCGGTCAAGATGAGGGTGCAC 108097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212511498000