Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq52 159 4e-34 seq144 152 6e-32 seq53 143 3e-29 seq130 109 6e-19 seq125 98.7 1e-15 >seq52 Length=173047 Score = 159 bits (176), Expect = 4e-34 Identities = 564/864 (65%), Gaps = 29/864 (3%) Strand=Plus/Minus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || ||||||||||| || || ||||| |||| | | || ||||||| || || |||||| Sbjct 72372 GAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCAC 72313 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 || || || ||||| || || || ||||| |||||||| ||||| ||||||||| ||| Sbjct 72312 AAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCC 72253 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087 ||||| |||| ||||| | || ||||| |||| | | ||| || | ||| | | Sbjct 72252 TTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGC 72193 Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTG-CCTTCGGCCACATACTTGGCGTAAGCTTC 81146 | | ||||| | | ||| || | | ||||| | | || || || || | | Sbjct 72192 TTCTGTGCCTTCA-TAGTTTGTCGACCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTGC 72134 Query 81147 GTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 ||||||| | | || | | || || | || | || ||| || ||||| | || Sbjct 72133 TTCGAACTCGTCGCCATAGCAG-TCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAGAG 72075 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 |||||| || ||||| || ||||||||| || |||||||| || || || Sbjct 72074 TCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGA 72015 Query 81266 ACAGGTCGCGGCAGCGC--GCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323 ||| || || ||| | ||||||| | || || || || | | | || || Sbjct 72014 ACAAATCACG--AGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTC 71957 Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA--TCGAC----CCCTTGCGACG 81377 | | || |||||||| ||||| ||||| | ||||| || | | |||| | Sbjct 71956 AAATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTA-- 71899 Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 ||||| || | ||| || ||||| || || ||| || | | ||| || | || ||| Sbjct 71898 -CCACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACC 71840 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTG---AT 81494 | || |||||| || || | || || || | || || | ||| || || Sbjct 71839 GTTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTG-TGAACAT 71781 Query 81495 TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATA 81554 | ||||| |||||||| | ||||| ||| |||||| || | || || || Sbjct 71780 T--CAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTA 71723 Query 81555 AATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT 81614 || ||||| || |||| |||||||| | | ||| || |||||| | | ||| Sbjct 71722 GATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTT--GTGCT 71665 Query 81615 TTT--TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTT-TGACAT 81671 | | || ||| || |||||||| || || | || || | ||| | | || ||||| Sbjct 71664 TGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGT-AAACATCTTTTGGGACAT 71606 Query 81672 CAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731 |||| ||||| || || | | ||| ||||| |||||||| || | || ||||| Sbjct 71605 GAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACACG 71546 Query 81732 CATAAACATGTACTGGGGCGTCTC 81755 ||||| ||||| ||||||| |||| Sbjct 71545 CATAAGCATGTGCTGGGGCCTCTC 71522 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| || || |||||||| ||||||||||| ||| |||||||||| | |||||| || Sbjct 73255 CGTTCGGAGGTAGTACATACCCGTCTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGGA 73196 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 | | ||| | | || || | | || |||||| |||||||| || ||| || Sbjct 73195 CGTAATCTTGCCCATGGTTGGCTCTTTCAAATGGATGTTGAGAGACTGCGATTGATCAAT 73136 Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 |||||| ||||| || || ||||||| || || | ||||| || ||||| || || Sbjct 73135 GAAAGCACCACGGTCGGCGGCCATTTGGATGATCGTTCGTTGTGAGATCTCCCAGACGGT 73076 >seq144 Length=62325 Score = 152 bits (168), Expect = 6e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || |||||||| ||||| | Sbjct 23270 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTAGC 23329 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || || |||||||||||||| ||||| || ||||| Sbjct 23330 GACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAA 23389 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| ||||| |||||||| || || || |||| ||| ||| | ||| ||||| || Sbjct 23390 CAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGC-GACTACAA 23448 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || || | || | |||||||| ||||| Sbjct 23449 CATCCAGAAAGAGTCAACCCTCCACTTGGTGCTCCGTCTTCGTGGTGG 23496 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || ||||| |||||||||||| Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| || |||||||||||||| ||||||||||| |||||| Sbjct 23558 GACACTATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAG 23617 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || ||||| ||||| || || || | || ||||| | ||||| || Sbjct 23618 CAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACAAC 23677 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || ||||| || | ||||| || ||||| Sbjct 23678 ATCCAGAAGGAGTCCACCCTGCATCTTGTGCTTCGTCTCCGTGGTGG 23724 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| || ||||| |||||| | || || || || Sbjct 23954 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCA 24013 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || ||||| ||||||||||| ||||| || || || Sbjct 24014 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCAA 24073 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| |||| ||||||||||||||| | ||||||| |||||| || | ||||| || Sbjct 24074 CAGCGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAAC 24133 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||| ||| || || || || Sbjct 24134 ATTCAGAAGGAGAGCACGCTACACCTGGT 24162 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || ||||| || || || || || ||||| || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | ||||| || |||||||| || ||||| || ||||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| |||||||||||||| | | || || ||||||| || Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAAC 23905 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| ||||| || || Sbjct 23906 ATCCAGAAGGAGTCGAC 23922 >seq53 Length=169705 Score = 143 bits (158), Expect = 3e-29 Identities = 310/452 (69%), Gaps = 20/452 (4%) Strand=Plus/Minus Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772 ||||||||||| || ||||| || || || |||||||| || || || || || Sbjct 76538 TCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTC 76479 Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 || |||||||| || ||||| || || ||||||||||| | || || ||||| || || Sbjct 76478 CATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTTACCTTCTCCAACGAACTCAT 76419 Query 64833 CTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGA 64892 ||| || |||||||| | ||| || || || ||| || ||||||||| | Sbjct 76418 CTCCCGAGACGAGGGCATGCACACTGACTTCGCATGCCTCCTTCTCTCCCACCTCAACCA 76359 Query 64893 CAAACCATCACATGGGACTATAATTGATATAGT-AAAATC--GGCTGTAGAAATTGAAAA 64949 | |||||| | ||| | | ||||| | ||| | ||| ||| || | || || | Sbjct 76358 CCGTCCATCAAA--GGA-TGTCATTGAGAAAGTCATCATCGAGGCCGTCGGCATCGAGCA 76302 Query 64950 GGAATTCATTACTGCCGCGCTTCCGTGTCG-TCTCATCGGCATGGATGCCGATA---AGA 65005 ||||||| |||| | || | ||| |||| ||| | |||||| | | ||| | Sbjct 76301 GGAATTCCTTACGGAAGC-CCTCCCCGTCGCTCTGTTGGGCATGAA---CCATACCCTCA 76246 Query 65006 TGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCC- 65064 |||| ||||||||||| || || || || || ||| || |||| ||| || ||| Sbjct 76245 TGAAGCAGTATATCGAGTTCGTCGCCGACCGACTG-TTGGTCAGCATGG--GCAATCCCA 76189 Query 65065 --TACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGA 65122 |||| || || | || ||||| |||| ||||||| ||| ||||| || |||| Sbjct 76188 AGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGCAAGA 76129 Query 65123 CTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 ||||||| || || ||| | || ||||||||| Sbjct 76128 CTAACTTCTTCGAGAAGCGCGTCGGTGATTAC 76097 >seq130 Length=70983 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 38171 CTTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCAT 38112 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| || || |||||||||||||| || || || ||||||||||| | Sbjct 38111 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGATT 38052 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| ||||| || | || ||||| | ||||| || |||| || Sbjct 38051 GATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAACATCCAGAA 37992 Query 27594 GGAAT 27598 || || Sbjct 37991 GGTAT 37987 >seq125 Length=76066 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| || || || || ||||||||||| | || || || || ||||| |||||| Sbjct 47444 GACAAGGAAGGCATCCCACCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAG 47385 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| ||||| || ||||| || | Sbjct 47384 GATGGCCGAACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTACTC 47325 Query 27619 CGTCTTCGCGGTGG 27632 |||||||| ||||| Sbjct 47324 CGTCTTCGAGGTGG 47311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306764271200