Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq144 120 2e-22 >seq144 Length=62325 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || || | |||| || || ||||||||||| |||||||| || || ||| Sbjct 24180 CCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 24121 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || | ||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 24120 AGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGA 24061 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| || | || ||| | ||| |||||| || || Sbjct 24060 ATACCCTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGAC 24002 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || |||||||||||||| Sbjct 24001 TTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || ||||| ||||||| |||| || ||||| || || || || Sbjct 23917 CTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAA 23858 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||||||||||| || || | || ||||||||| ||| ||| | || || Sbjct 23857 GATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGGAT-TTTCGACTTGACAT 23799 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | |||||||| | || ||||| | || || ||||| || |||| || || | Sbjct 23798 TGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGA 23739 Query 34694 CAAAAATCTGCAT 34706 |||| || ||||| Sbjct 23738 CAAAGATTTGCAT 23726 Score = 82.4 bits (90), Expect = 5e-11 Identities = 164/237 (69%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | |||||| ||||| || ||| || || ||||| || || | Sbjct 23496 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTC 23437 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || ||| || | |||||||| |||||||| || || || | ||| |||||||| || | Sbjct 23436 AAGGTG--CGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGG 23379 Query 34598 GCACTCCCTCCTTGTCTGTGATCTT-TTGTTTTAACGATAAAATTGTGTCTTCGCT---C 34653 | | ||||||||||| |||||| | ||| | || || ||| ||||| | Sbjct 23378 GAATGCCCTCCTTGTCCTGGATCTTGCTCTTTACATTAT-CGATGGTG---TCGCTAGAC 23323 Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || || | ||| || || || || || | || || || || |||||||| ||| Sbjct 23322 TCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTTG 23266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727643758830