Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 3e-15 >seq34 Length=205218 Score = 96.9 bits (106), Expect = 3e-15 Identities = 264/404 (65%), Gaps = 9/404 (2%) Strand=Plus/Plus Query 34221 TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGT 34280 ||||||| || || || ||||| || | | | |||| ||| ||||| || |||| Sbjct 6522 TTCCGCTCCTAACTACAAAACGGGTCTTCACACGCGCCGTGATCGCCGAGCTTCTCTGGT 6581 Query 34281 TCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACG 34340 | | | ||| | ||||| | ||| |||||||| || || || | |||||||||| Sbjct 6582 TTATCAAGGGATCGACGAATAGCAAAGAGCTCTCCGACCAAGGTGTACATATCTGGGACG 6641 Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCC-------CATCTCGGGAGGAG 34393 | ||| | || || || ||||| | || ||| || || || ||| Sbjct 6642 GCAATGGGAGCAGGGAGTTCCTCGACAAACTCGG--TCCGCCGCAGCACTGCGTGAAGAG 6699 Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || ||| |||| || ||||||||||| |||||| | || || ||||| |||||| | Sbjct 6700 GGTGACCTGGGACCCGTCTACGGGTTTCAGTGGCGCCATTTCGGGGCAGAGTATAAAGAC 6759 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 || | |||||||| | ||||| |||| |||||| | || | | || ||| | Sbjct 6760 TGCCATGCGGACTACGCAGGACAAGGAGTCGACCAGATCAAGGAGATCATATACAAGCTC 6819 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 || | || || | ||| | || || || || |||||||||| | | |||| | Sbjct 6820 AAACACAAGCCATACGACCGGAGAATATTGCTGAGCGCGTGGAATGTGGCAGCTCTCAAT 6879 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 |||||| | || |||||||| ||| ||||||||||| Sbjct 6880 TCTATGGCGTTGCCGCCGTGCCATCTCCTGGCACAATTCTACGT 6923 Score = 96.9 bits (106), Expect = 3e-15 Identities = 264/404 (65%), Gaps = 9/404 (2%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 ||||||||||| ||| |||||||| || | |||||| | |||| | | Sbjct 6923 ACGTAGAATTGTGCCAGGAGATGGCACGGCGGCAACGCCATAGAATTGAGAGCTGCCACA 6864 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||||| || || || || | ||| | || || | || | ||| || | Sbjct 6863 TTCCACGCGCTCAGCAATATTCTCCGGTCGTATGGCTTGTGTTTGAGCTTGTATATGATC 6804 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | || | |||||| |||| ||||| | |||||||| | || | |||||| ||| Sbjct 6803 TCCTTGATCTGGTCGACTCCTTGTCCTGCGTAGTCCGCATGGCAGTCTTTATACTCTGCC 6744 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG-- 6965 || || || | |||||| ||||||||||| || |||| ||| ||||| || || || Sbjct 6743 CCGAAATGGCGCCACTGAAACCCGTAGACGGGTCCCAGGTCACCCTCTTCACGCAGTGCT 6684 Query 6966 -----GGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020 ||| || | ||||| || || || | ||| | |||||||||| | || Sbjct 6683 GCGGCGGA--CCGAGTTTGTCGAGGAACTCCCTGCTCCCATTGCCGTCCCAGATATGTAC 6626 Query 7021 CCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080 || || |||||||| ||| | ||||| | ||| | | ||||| || ||||| | Sbjct 6625 ACCTTGGTCGGAGAGCTCTTTGCTATTCGTCGATCCCTTGATAAACCAGAGAAGCTCGGC 6566 Query 7081 GACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAA 7124 || |||| | | | || ||||| || || || ||||||| Sbjct 6565 GATCACGGCGCGTGTGAAGACCCGTTTTGTAGTTAGGAGCGGAA 6522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259542327200