Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq144 176 1e-38 seq130 129 1e-24 seq125 96.9 8e-15 >seq144 Length=62325 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || |||||||| || |||||||| || || | ||||| | || ||| Sbjct 23709 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 23650 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || | || ||||||||||||| ||||||||||||| Sbjct 23649 TCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 23590 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || ||||||||||||||||| ||| Sbjct 23589 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTC 23530 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 23529 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 154 bits (170), Expect = 3e-32 Identities = 174/229 (76%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || | ||| || || |||||||| |||||||| || || | ||||| Sbjct 23491 ACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGG- 23433 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | |||||||| ||||| || || ||||| ||||| ||||||||||| || |||| | Sbjct 23432 TGCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGC 23373 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCT 211068 | ||||||||||||||||| || || || ||||||||||| ||| || |||| Sbjct 23372 CCTCCTTGTCCTGGATCTTGCTCTTTACATTATCGATGGTGTCGCTAGA---CTCGACCT 23316 Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | || ||||| ||||| || ||||| ||||| || || | |||||| || Sbjct 23315 CAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTT 23267 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || ||||| | || ||||| || |||||||| || || | || || || || Sbjct 23941 TCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCC 23882 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 || || || |||||||| |||||||| || || |||||||| || |||| |||||||| Sbjct 23881 GTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTT 23822 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || || ||||| ||||| ||| |||||| ||||| ||||| Sbjct 23821 GTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGAT 23762 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || |||||||| ||||| | ||||| Sbjct 23761 GGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq130 Length=70983 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | || ||||| |||||||| || |||||||| Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || || | || ||||||||||||||||| || || || ||| Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 38111 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 38112 ATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGAA 38170 >seq125 Length=76066 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || || || |||||||| || |||||||| || |||| ||| || Sbjct 47317 CGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTT 47376 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || ||||||||||| |||||||| | || || ||||| || || | ||| Sbjct 47377 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCT 47436 Query 211014 TCCTTGTC 211021 |||||||| Sbjct 47437 TCCTTGTC 47444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144425666150