Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq144 100 2e-16 >seq144 Length=62325 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || || ||||| || || ||| | ||||| || || | Sbjct 23954 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCA 24013 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| || ||| | || || |||||| Sbjct 24014 GACACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCAA 24073 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| ||||| ||||| || || ||| |||| || | || ||| | ||| |||||| Sbjct 24074 CAGCGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAAC 24133 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAG 23842 || || || ||| ||| |||| | ||| | | || ||||||| |||| Sbjct 24134 ATTCAGAAGGAGAGCACGCTACACCTGGTTCTCCGACTGAGAGGAGG-TCAG 24184 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || ||||| ||||| ||||||||||| ||| | Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||||| ||||| ||||| | || || || || Sbjct 23786 GACACAATCGACAATGTCAAGTC-GAAAATCCAAGACAAGGAAGGCATTCCACCCGACCA 23844 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| ||||| || |||| | || | || ||||| Sbjct 23845 ACAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAA 23904 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||| || || || | ||| | || || ||||| || Sbjct 23905 CATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGG 23952 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||||||||| ||||| || | Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| ||||| ||||| | || || || || Sbjct 23558 GACACTATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAG 23617 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || ||||| || || ||||||| || || | ||| |||||| Sbjct 23618 CAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACAAC 23677 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 23678 ATCCAGAAGGAGTCCAC 23694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007499059080