Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq144 150 4e-31 seq130 129 1e-24 seq125 98.7 2e-15 seq431 87.8 4e-12 >seq144 Length=62325 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 |||||| || ||||| | || || || || |||| ||||| || | | ||||| || Sbjct 23941 TCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCC 23882 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 || || || ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct 23881 GTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTT 23822 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| ||| ||||| ||||| |||| ||| || || | |||||| Sbjct 23821 GTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGAT 23762 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || | ||| || | || | |||||| Sbjct 23761 GGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||| || || ||||| |||| ||||| ||| ||| || Sbjct 23491 ACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGT 23432 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||| || Sbjct 23431 GCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCC 23372 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | || || || | Sbjct 23371 CTCCTTGTCCTGGATCTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACCTCAAG 23312 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | || || | ||| | ||||| || Sbjct 23311 GGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTT 23267 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || || ||||| || || |||| ||||| |||| | |||| || ||| Sbjct 23709 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 23650 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| |||| || ||||| || ||||| ||||||||||| Sbjct 23649 TCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 23590 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| || | || || || | ||||| ||| Sbjct 23589 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTC 23530 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 23529 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| || || ||||| || ||| || || || | ||||| |||| | ||| | Sbjct 24171 AGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGA 24112 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || | ||||| ||||| ||||| | ||| ||||| || || |||||||| ||| Sbjct 24111 CCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACCCTCC 24052 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| ||||| ||| || || ||||||||||| | ||| || || || || Sbjct 24051 TTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTA 23992 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||| || || | ||| || Sbjct 23991 ATGGTCTTTCCAGTAAGAGTCTT 23969 >seq130 Length=70983 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | |||| || ||||| |||||||| || |||||||| Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || |||||||| || ||||| |||||||| |||||||| ||| ||| ||| Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 38111 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||||||||| || || || | ||||| ||||||||||| Sbjct 38112 ATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 38155 >seq125 Length=76066 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || || ||||| ||||| || || |||| ||||| || | | |||| Sbjct 47317 CGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTT 47376 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| || |||||||| | ||| || |||||||| || || ||| Sbjct 47377 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCT 47436 Query 225613 TCCTTGTCTTGG 225624 ||||||||| || Sbjct 47437 TCCTTGTCTGGG 47448 >seq431 Length=963 Score = 87.8 bits (96), Expect = 4e-12 Identities = 161/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 7480 GGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTG 7539 |||||| |||||| | |||| || ||||||||| | | || ||| ||| ||| Sbjct 276 GGTACTTCTTTTTCTGTTCTTATTAGATTAGAATTATCCGGACCAGGTGTTCAG-TATAT 334 Query 7540 AGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTC 7599 || | | | ||| | || || ||| || || ||||| || | |||||||| || Sbjct 335 AGCAG--ACAATCAATTATATAATAGTATAATAACAGCGCACGCTATAGTTATGATATTT 392 Query 7600 TTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATT 7659 ||| | |||||||| | | ||||| || |||||||||| || | || || | | Sbjct 393 TTTATGGTTATGCCAGCACTTATAGGAGGGTTCGGAAATTTCTTATTACCATTGTTAGTC 452 Query 7660 GGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || | |||||||||||| || || || | || || |||||||| |||||| || Sbjct 453 GGAGGTCCTGATATGGCATTCCCTAGATTGAATAACATAAGTTTCTGATTATTA 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192523407553940