Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq52 163 4e-35 >seq52 Length=173047 Score = 163 bits (180), Expect = 4e-35 Identities = 423/642 (66%), Gaps = 2/642 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||| ||||| || | ||| || ||||| |||||| || | ||| || | |||| Sbjct 72054 ACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAACC 71995 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || ||||| ||||||| || | | ||||| | | ||| | |||||| || Sbjct 71994 TCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAGGC 71935 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182 || ||||| || || | | ||||||| || ||||| || ||||| | ||| | |||| Sbjct 71934 TCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCACCTTGATCGACATAGCGGGCG 71875 Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242 ||||| | | | || || | ||| || | | |||||| ||||| || || || || | | Sbjct 71874 GTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGGCA 71815 Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302 || || || | || || || || || | || || || || || | || Sbjct 71814 ATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTTTT 71755 Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362 || || | ||| ||| || | || ||||||||||||||||| ||| ||| ||||| Sbjct 71754 GAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCATG 71695 Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422 | | || || || |||||||| || || ||||| || || | || || Sbjct 71694 TCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGC 71635 Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG 78482 || ||||| |||||| |||| || | || ||||| || || || || ||| ||| Sbjct 71634 GAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCAATG 71575 Query 78483 TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTC 78542 || | ||||| ||||| | |||||||| | ||| ||||| || || || | | | Sbjct 71574 TCGTCTCCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCCTCTC-CCAGAC 71516 Query 78543 TTATTATTTAT-TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 || | | || ||||| | ||||||| | ||||| || || || ||||| || | ||| Sbjct 71515 TTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTACTGGTA 71456 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC 78643 ||||| | ||||| | || |||| || || | ||| Sbjct 71455 GTTGAAGTCACGGTCGTAGACGATGGCAGAGTTGAGCTCATC 71414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664371486400