Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq144 178 3e-39 seq130 132 1e-25 seq125 102 2e-16 >seq144 Length=62325 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | ||| || || ||||| |||| |||||| || || || ||||||||||| | Sbjct 24181 ACCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGA 24122 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| | ||| || || |||||||| || || ||||| || || Sbjct 24121 AAGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGG 24062 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||| ||||| | || ||| | || || ||||| |||| |||||| Sbjct 24061 AATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGAC 24002 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || ||||| || || | |||||| || || |||||||| Sbjct 24001 TTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 163 bits (180), Expect = 6e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || ||||| | ||| || || |||||||||||||| | Sbjct 23725 ACCACCACGGAGACGAAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 23666 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || || || ||||||| | || |||||| || Sbjct 23665 GAGGGTTCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGG 23606 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| || ||||| ||| || ||| | ||||||||||| || | || | Sbjct 23605 AATTCCTTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATAGTGTCGGATGACTCAA 23547 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||||||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 23546 CCTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 154 bits (170), Expect = 3e-32 Identities = 177/233 (76%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || |||| || | || ||||| |||||||||||||| Sbjct 23497 ACCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCT 23438 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| ||||| || || ||||| || || || || | |||||||||||| | Sbjct 23437 CAAG-GTGCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGG 23379 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||| ||||||||||| |||||| ||||| ||||| ||||||| ||||| || ||| Sbjct 23378 GAATGCCCTCCTTGTCCTGGATC-TTGCTCTTTACATTATCGATGGTGTCGCTAGACTCG 23320 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || ||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 23319 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTT 23267 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || | | || ||||| || ||||| || || |||||||||||||| | Sbjct 23953 ACCACCTCGTAATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGA 23894 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| ||||| || || || ||||||| || |||||||| || Sbjct 23893 GAGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGG 23834 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||||||||| || | || || | ||||| ||||| || | ||| || Sbjct 23833 AATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAAC 23774 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| || || || || | |||||| || || || ||||| Sbjct 23773 TTCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq130 Length=70983 Score = 132 bits (146), Expect = 1e-25 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||| || || || || || ||||| |||||| Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 || || || ||||| || |||||||||||||| |||||| ||||| || || | || Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 38110 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | ||||| || || ||||| ||||| ||||| | ||||||||||| Sbjct 38111 GATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGAA 38170 >seq125 Length=76066 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || ||||| ||||| | ||| || || |||||||||||||| | Sbjct 47310 ACCACCTCGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 47369 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| || || || ||||| |||||||| || || ||||| || Sbjct 47370 AAGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGG 47429 Query 282992 AATACCCTCCTTGTCTTGG 283010 || || ||||||||| || Sbjct 47430 GATGCCTTCCTTGTCTGGG 47448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732360213540