Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq144 156 1e-32 seq130 147 5e-30 seq125 96.9 8e-15 >seq144 Length=62325 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||| |||||||| || || ||| Sbjct 23501 CAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCCGAC 23560 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| |||||||| ||||| |||||||| Sbjct 23561 ACTATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAG 23620 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || || ||||| ||||| || | || || |||| || ||| || Sbjct 23621 AGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACAACATC 23680 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||||||||| Sbjct 23681 CAGAAGGAGTCCACCCTGCATCTTGT 23706 Score = 129 bits (142), Expect = 1e-24 Identities = 157/209 (75%), Gaps = 9/209 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || |||||||| ||||| || ||| Sbjct 23273 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTAGC--- 23329 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| || || || ||||| |||||||| || || || || || ||||| Sbjct 23330 GACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAA 23389 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099 ||||| ||||| ||||| || |||||||| |||||||| | || |||| ||| || || Sbjct 23390 CAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCAC-CTTGAGCGACTACAA 23448 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTG 178128 | |||| ||||| ||||| || || |||| Sbjct 23449 CATCCAGAAAGAGTCAACCCTCCA-CTTG 23476 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || ||||| || || || | || || ||| |||||| Sbjct 23957 CAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCAGAC 24016 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| || || || || ||||| || || Sbjct 24017 ACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCAACAG 24076 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || || || | || ||||| | |||||| |||| || ||| | Sbjct 24077 CGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAACATT 24136 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || || ||| | |||| ||| Sbjct 24137 CAGAAGGAGAGCACGCTACACCTGGTTCTCCGACTGAGA 24175 >seq130 Length=70983 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| ||||| || ||||||||||||| Sbjct 38170 TTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATC 38111 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || || ||||| || |||||||| ||| | Sbjct 38110 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGATTG 38051 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||||||||| ||||||||||| || | || || |||| || ||| |||| || Sbjct 38050 ATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAACATCCAGAA 37992 >seq125 Length=76066 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| ||||| || |||||||| ||| | ||||||||||| || |||||||| Sbjct 47444 GACAAGGAAGGCATCCCACCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAG 47385 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | || || ||| |||| || || || || || ||||| || Sbjct 47384 GATGGCCGAACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGT 47329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723334368940