Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 105 1e-17
seq1604 86.0 1e-11
>seq1008
Length=41606
Score = 105 bits (116), Expect = 1e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|| ||||| || | || ||| |||||||| || ||||| ||||| || | ||||
Sbjct 2237 GGTATGAATGCAAACCTCATGAAGCAGTACATTGAGTTCGTGGCCGATCGTCTGCTTGTC 2296
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
|| | || | ||||| || ||| ||||| ||||| || | || |||||| ||||
Sbjct 2297 GCTTTGGGCAATGAGAAGGTCTACCGCTCTACCAACCCGTTCGATTTCATGGAGAACATT 2356
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
||||| || ||||| ||||||||||||||||| ||| |||| || |||| | | |||
Sbjct 2357 TCGCTCGGTGGCAAGACAAACTTCTTCGAAAAGCGCGTCGGTGATTACCAGAAGGCCGGT 2416
Query 230632 GTGATG 230637
|| |||
Sbjct 2417 GTTATG 2422
>seq1604
Length=18022
Score = 86.0 bits (94), Expect = 1e-11
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATC-CGCAGA--GGGGAACCCTTC 319868
||| || |||||||| ||| | ||||||| ||| || | | | |||||| || ||
Sbjct 6307 GTCAAGGTCGTGTTCGACGAAGACAGTTTT---AACCTCGCTCTGCTTGGGGAAGCCCTC 6251
Query 319869 AAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACA 319928
| ||| |||| || ||||||||||| ||||| || |||| ||||| || || ||
Sbjct 6250 GACCTGTTCGTTGTTGATGGCGCGCATCAGAGTTGACTTGCCCGAACCGTTGGGACCGCA 6191
Query 319929 CAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCC 319988
||||||||||| || || || || | | || | ||| || || ||||| |
Sbjct 6190 AAGACCGTAGCGACGACCACGCTTTAGTCGTAGGTGTGTCTGGTTGAGCAGGATTTTGGC 6131
Query 319989 ACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||| || || ||||| ||| |||| || |||||||||||
Sbjct 6130 ACCGTAGGCGAGAGAGAATGTGCAATTGCAGAGATCCTCACC 6089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057800159622170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |