Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1008 109 6e-19 >seq1008 Length=41606 Score = 109 bits (120), Expect = 6e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || || ||||| || ||| | |||||||| ||||||||||| ||||| Sbjct 1793 ATATAGGTGTCAATGAGCAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 1734 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| ||||| | || ||||| || | ||| || || | ||| Sbjct 1733 AAACCGTAGAAGCATCGAGCTTCGGGAATCTGAACCTCGCCACTGAAACGCTCAACAAGA 1674 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| ||||| ||||| || || ||||| || || |||||| ||| Sbjct 1673 TTCTCGTTGACGATACCGTCCGAGGCGGCAAAGAAGGCCAAGATGTGGGAAATGAAGTAT 1614 Query 17414 TTTTCGTC 17421 || ||||| Sbjct 1613 TTCTCGTC 1606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517534220466120