Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 104 2e-17
>seq1008
Length=41606
Score = 104 bits (114), Expect = 2e-17
Identities = 199/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
||||| || ||||| || | | ||| | || ||||| |||||||| || |||||
Sbjct 1793 ATATAGGTGTCAATGAGCAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 1734
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCA 16589
|| || |||||||||||||| || | || || || || ||| ||| || || | |
Sbjct 1733 AAACCGTAGAAGCATCGAGCTTCGGGAATCTGAACCTCGCCACTGAAA--CGCTCAACAA 1676
Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649
| ||||| || ||||||||||| || ||||| || ||||| ||||| |||||| |
Sbjct 1675 GATTCTCGTTGACGATACCGTCCGAGGCGGCAAAGAAGGCCAAGATGTGGGAAATGAAGT 1616
Query 16650 ATTTTTCGTC--AGATG-TAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706
|||| ||||| | || | | | | ||| || | | || ||||| | ||| | |
Sbjct 1615 ATTTCTCGTCTTCGTTGATTCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAGATCGATCT 1556
Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
| |||| ||||| ||| ||| | || || || ||||||| ||| ||
Sbjct 1555 CCTCTGCAGTCCAGAAGGATGCCTCGGCTTTCTTGTACATTTGCCAGAT 1507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511403155275880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |