Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1413 100 2e-16 >seq1413 Length=23416 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| |||||||| || || ||||| ||| ||| |||| | || Sbjct 19270 ATGCAGATCTTCGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAATCGTCA 19211 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| || ||| || || |||||| | || ||| || Sbjct 19210 GATACCATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 19151 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | |||||||| || || || || ||||||||| |||| || |||||||||| Sbjct 19150 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGAACTCTGAGCGATTACAAT 19091 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || |||||||| |||||||| ||| | ||| Sbjct 19090 ATCCAGAAGGAGTCTACTCTCCACCTAGTG 19061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428326817413145